RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 MAGEA13PA6NCF6 341 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 CEACAM18A8MTB9 384 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 A8MXK9 166 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 B4DSR2 109 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 H3BUI4 141 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 GABRPO00591 440 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 PDCD5O14737 125 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 PIN1P1O15428 100 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 FOXH1O75593 365 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 KDM4BO94953 1096 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 INMTO95050 263 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 KNG1P01042 644 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 UBBP0CG47 229 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 SRMP19623 302 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 GATA3P23771 443 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 MYL9P24844 172 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 FGF9P31371 208 aaPredicted RBP7.28□□□□□ -1.24
COL28A1-205ENST00000453441 CD80P33681 288 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 MTNR1BP49286 362 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 POU3F4P49335 361 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 CAPZA1P52907 286 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 ZP1P60852 638 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 ERVK11-1P61568 191 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 LMO4P61968 165 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 RPS25P62851 125 aaKnown RBP7.28□□□□□ -1.24
COL28A1-205ENST00000453441 SSX1Q16384 188 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 ESCO2Q56NI9 601 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 SPIN3Q5JUX0 258 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 GLT8D1Q68CQ7 371 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 STUMQ69YW2 141 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 ASPHD2Q6ICH7 369 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 ASCL4Q6XD76 172 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 ACP7Q6ZNF0 438 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 TEX29Q8N6K0 151 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 BOLLQ8N9W6 283 aaKnown RBP7.28□□□□□ -1.24
COL28A1-205ENST00000453441 LINC01356Q8N9X3 169 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 OR51F2Q8NH61 342 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 TMEM203Q969S6 136 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 TMEM246Q9BRR3 403 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 MRPS26Q9BYN8 205 aaKnown RBP7.28□□□□□ -1.24
COL28A1-205ENST00000453441 SMURF1Q9HCE7 757 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 DCAF16Q9NXF7 216 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 IL36GQ9NZH8 169 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 NLKQ9UBE8 527 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 SSR3Q9UNL2 185 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 POLR3KQ9Y2Y1 108 aaPredicted RBP7.28□□□□□ -1.24
COL28A1-205ENST00000453441 TLN2Q9Y4G6 2542 aa7.28□□□□□ -1.24
COL28A1-205ENST00000453441 VPS13CQ709C8 3753 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 TRAV8-7A0A075B6U6 113 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 TRAV20A0A0B4J274 112 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 OR2AT4A6NND4 320 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.27□□□□□ -1.25
COL28A1-205ENST00000453441 TNFRSF13BO14836 293 aaPredicted RBP7.27□□□□□ -1.25
COL28A1-205ENST00000453441 AKR7A2O43488 359 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 SYNGR1O43759 233 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 CD5LO43866 347 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 RHBDL1O75783 438 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 ECDO95905 644 aaPredicted RBP7.27□□□□□ -1.25
COL28A1-205ENST00000453441 WNT2P09544 360 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 TMEM225BP0DP42 221 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 EGR1P18146 543 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 PTGFRP43088 359 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 PITPNBP48739 271 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 DVL1P1P54792 670 aaPredicted RBP7.27□□□□□ -1.25
COL28A1-205ENST00000453441 IL13RA1P78552 427 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 FABP5Q01469 135 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 CD276Q5ZPR3 534 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 ELP2Q6IA86 826 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 TMEM91Q6ZNR0 172 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 LINC00596Q86U02 117 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 SATL1Q86VE3 508 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 GLCCI1Q86VQ1 547 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 ANGPTL5Q86XS5 388 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 ZNF561Q8N587 486 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 JAGN1Q8N5M9 183 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 OR52N4Q8NGI2 321 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 OR51A2Q8NGJ7 313 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 ANGPTL6Q8NI99 470 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 PPP1R35Q8TAP8 253 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 TNFAIP8L1Q8WVP5 186 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 MRPS24Q96EL2 167 aaKnown RBP7.27□□□□□ -1.25
COL28A1-205ENST00000453441 SDSLQ96GA7 329 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 FAM234AQ9H0X4 552 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 METTL9Q9H1A3 318 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 MTCH1Q9NZJ7 389 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 YLPM1P49750 1951 aaKnown RBP7.27□□□□□ -1.25
COL28A1-205ENST00000453441 MALRD1Q5VYJ5 2156 aa7.27□□□□□ -1.25
COL28A1-205ENST00000453441 CELSR1Q9NYQ6 3014 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 HIVEP2P31629 2446 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 A0A1W2PPK0 400 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 J3QLI3 93 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 SMAD7O15105 426 aaKnown RBP7.26□□□□□ -1.25
COL28A1-205ENST00000453441 SIGLEC5O15389 551 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 ADAM20O43506 726 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 NDUFB3O43676 98 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 TMEM127O75204 238 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CSTBP04080 98 aaKnown RBP7.26□□□□□ -1.25
COL28A1-205ENST00000453441 MAS1P04201 325 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 MSMBP08118 114 aa7.26□□□□□ -1.25
COL28A1-205ENST00000453441 CHRM2P08172 466 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms