RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 LIMS4P0CW20 117 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 CD28P10747 220 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 PSG2P11465 335 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 ACKR3P25106 362 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 C21orf33P30042 268 aaPredicted RBP9.45□□□□□ -0.9
HERC3-207ENST00000452979 ATP6V1E1P36543 226 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 OPRL1P41146 370 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 GMFBP60983 142 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 ST3GAL4Q11206 333 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 RBM48Q5RL73 367 aaKnown RBP9.45□□□□□ -0.9
HERC3-207ENST00000452979 NDUFA11Q86Y39 141 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 MKXQ8IYA7 352 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 ZNRF1Q8ND25 227 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 WFDC9Q8NEX5 89 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 OR2T27Q8NH04 317 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 SDSLQ96GA7 329 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 RNF170Q96K19 258 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 CDCA4Q9BXL8 241 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 MMP28Q9H239 520 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 DUSP21Q9H596 190 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 ZNF702PQ9H963 129 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 ERVK13-1Q9NX77 482 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 LAMP5Q9UJQ1 280 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 DIMT1Q9UNQ2 313 aaKnown RBP9.45□□□□□ -0.9
HERC3-207ENST00000452979 LRP12Q9Y561 859 aa9.45□□□□□ -0.9
HERC3-207ENST00000452979 EFCAB10A6NFE3 127 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 FAM90A8PA6NJQ4 464 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 VGLL3A8MV65 326 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 PTGES3LE9PB15 166 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 ZNF670-ZNF695F2Z2N8 137 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 FADS2O95864 444 aaKnown RBP9.44□□□□□ -0.9
HERC3-207ENST00000452979 CDK1P06493 297 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 GLRA1P23415 457 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 PAX6P26367 422 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 ETV1P50549 477 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 ACTC1P68032 377 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 ACTA1P68133 377 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 NSUN5P1Q3KNT7 163 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 KLHL22Q53GT1 634 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 VAX1Q5SQQ9 334 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 ZNF684Q5T5D7 378 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 ZNF322Q6U7Q0 402 aaPredicted RBP9.44□□□□□ -0.9
HERC3-207ENST00000452979 PLEKHG7Q6ZR37 379 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 LYG1Q8N1E2 194 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 ACBD7Q8N6N7 88 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 OR4F17Q8NGA8 305 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 HPSE2Q8WWQ2 592 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 PIGCQ92535 297 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 PHF21AQ96BD5 680 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 TMEM80Q96HE8 168 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 PGAM5Q96HS1 289 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 OR4F4Q96R69 305 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 OR8B4Q96RC9 309 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 MNTQ99583 582 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 WNT10AQ9GZT5 417 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 OR51I2Q9H344 312 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 HEXA-AS1Q9H8Q6 139 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 ELL3Q9HB65 397 aaPredicted RBP9.44□□□□□ -0.9
HERC3-207ENST00000452979 C19orf12Q9NSK7 152 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 CLEC2DQ9UHP7 191 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 MRM2Q9UI43 246 aaKnown RBP9.44□□□□□ -0.9
HERC3-207ENST00000452979 DNAH9Q9NYC9 4486 aa9.44□□□□□ -0.9
HERC3-207ENST00000452979 COL7A1Q02388 2944 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 A0A1W2PPH5 198 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 DAPL1A0PJW8 107 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 IRGMA1A4Y4 181 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 RHBDL1O75783 438 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 DCKP27707 260 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 GABRA2P47869 451 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 BMXP51813 675 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 GABARAPL2P60520 117 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 ROM1Q03395 351 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 IRF3Q14653 427 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 GFOD2Q3B7J2 385 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 KCTD21Q4G0X4 260 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 TP53I3Q53FA7 332 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 FOXB2Q5VYV0 432 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 TMEM200BQ69YZ2 307 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 KCTD8Q6ZWB6 473 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 LHFPL3Q86UP9 236 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 ZDHHC23Q8IYP9 409 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 FAM185AQ8N0U4 392 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 THEM6Q8WUY1 208 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 ITFG2Q969R8 447 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
HERC3-207ENST00000452979 R3HDM4Q96D70 268 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 LYZL4Q96KX0 146 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 CITED2Q99967 270 aaPredicted RBP9.43□□□□□ -0.9
HERC3-207ENST00000452979 ALG8Q9BVK2 526 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 INPP5EQ9NRR6 644 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 SCN3BQ9NY72 215 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 RASL12Q9NYN1 266 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 TPRKBQ9Y3C4 175 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 TMEM14AQ9Y6G1 99 aa9.43□□□□□ -0.9
HERC3-207ENST00000452979 A6NDX4 124 aa9.42□□□□□ -0.9
HERC3-207ENST00000452979 SRSF10O75494 262 aaKnown RBP9.42□□□□□ -0.9
HERC3-207ENST00000452979 MTRF1O75570 445 aaKnown RBP9.42□□□□□ -0.9
HERC3-207ENST00000452979 MT-ND2P03891 347 aa9.42□□□□□ -0.9
HERC3-207ENST00000452979 H2BFMP0C1H6 154 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms