RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 IKZF1Q13422 519 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 DGUOKQ16854 277 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 Q499Y3 187 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 CRIP3Q6Q6R5 217 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 BTN2A1Q7KYR7 527 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 PRSS48Q7RTY5 328 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 RNF144BQ7Z419 303 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 BATF2Q8N1L9 274 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 ST8SIA4Q92187 359 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 SDSLQ96GA7 329 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 SPACA5Q96QH8 159 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 OR5M11Q96RB7 305 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 BLOC1S6Q9UL45 172 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 MAB21L2Q9Y586 359 aa16.52■□□□□ 0.24
COL9A3-202ENST00000452372 INMTO95050 263 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 KNG1P01042 644 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 HCKP08631 526 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 SELLP14151 372 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 ADRA2CP18825 462 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 PRDX2P32119 198 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 POU3F4P49335 361 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 MED22Q15528 200 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 KISS1Q15726 138 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 C1QL2Q7Z5L3 287 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 Q8IYB0 196 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 FGFRL1Q8N441 504 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 CD177Q8N6Q3 437 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 MRI1Q9BV20 369 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 TAS2R4Q9NYW5 299 aa16.51■□□□□ 0.23
COL9A3-202ENST00000452372 MAGEB3O15480 346 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 SPRY1O43609 319 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-202ENST00000452372 RRP9O43818 475 aaKnown RBP16.5■□□□□ 0.23
COL9A3-202ENST00000452372 GPX5O75715 221 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 PPIAL4GP0DN37 164 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 NPBWR2P48146 333 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 PNLDC1Q8NA58 520 aaKnown RBP16.5■□□□□ 0.23
COL9A3-202ENST00000452372 OR51A2Q8NGJ7 313 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 NANPQ8TBE9 248 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 RFT1Q96AA3 541 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 CCDC90BQ9GZT6 254 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 SLC25A10Q9UBX3 287 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-202ENST00000452372 METRNQ9UJH8 293 aa16.5■□□□□ 0.23
COL9A3-202ENST00000452372 RPUSD1Q9UJJ7 312 aaKnown RBP16.5■□□□□ 0.23
COL9A3-202ENST00000452372 FSHBP01225 129 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 ALDOBP05062 364 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 BCL3P20749 454 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 EEF1B2P24534 225 aaKnown RBP16.49■□□□□ 0.23
COL9A3-202ENST00000452372 CAV3P56539 151 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 GPR50Q13585 617 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 SAXO1Q8IYX7 474 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 ZNF561Q8N587 486 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 ZSCAN4Q8NAM6 433 aaPredicted RBP16.49■□□□□ 0.23
COL9A3-202ENST00000452372 ZNRF1Q8ND25 227 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 LY6G5BQ8NDX9 201 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 CPNE2Q96FN4 548 aaPredicted RBP16.49■□□□□ 0.23
COL9A3-202ENST00000452372 DMRTB1Q96MA1 342 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 OR14J1Q9UGF5 321 aa16.49■□□□□ 0.23
COL9A3-202ENST00000452372 TRBV5-7A0A0A0MS05 114 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 IGKV1-12A0A0C4DH73 117 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 ZNF879B4DU55 563 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 ANGPTL7O43827 346 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 IGKV1D-12P01611 117 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 IGFBP3P17936 291 aaPredicted RBP16.48■□□□□ 0.23
COL9A3-202ENST00000452372 ZP1P60852 638 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 PPP3R1P63098 170 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 FAM58AQ8N1B3 248 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 MS4A15Q8N5U1 240 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 OR5D18Q8NGL1 313 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 EMG1Q92979 244 aaKnown RBP16.48■□□□□ 0.23
COL9A3-202ENST00000452372 ORAI1Q96D31 301 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 OR14A2Q96R54 314 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 DCTN5Q9BTE1 182 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 SEBOXQ9HB31 216 aaPredicted RBP16.48■□□□□ 0.23
COL9A3-202ENST00000452372 RHOFQ9HBH0 211 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 ISYNA1Q9NPH2 558 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 TMEM138Q9NPI0 162 aa16.48■□□□□ 0.23
COL9A3-202ENST00000452372 TCF21O43680 179 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 KDM4BO94953 1096 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 NDUFB7P17568 137 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 TGFBR2P37173 567 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 CEBPDP49716 269 aaPredicted RBP16.47■□□□□ 0.23
COL9A3-202ENST00000452372 SCGB2A2Q13296 93 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 TMEM185AQ8NFB2 350 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 OR52N4Q8NGI2 321 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 C8orf46Q8TAG6 207 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 THRSPQ92748 146 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 UPRTQ96BW1 309 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 DERL3Q96Q80 235 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 YTHDF1Q9BYJ9 559 aaKnown RBP16.47■□□□□ 0.23
COL9A3-202ENST00000452372 CNTD2Q9H8S5 307 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 RBFOX1Q9NWB1 397 aaKnown RBP16.47■□□□□ 0.23
COL9A3-202ENST00000452372 CKLFQ9UBR5 152 aa16.47■□□□□ 0.23
COL9A3-202ENST00000452372 A0A1W2PPK0 400 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 MRPS14O60783 128 aaKnown RBP16.46■□□□□ 0.23
COL9A3-202ENST00000452372 CHRM2P08172 466 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 TMEM225BP0DP42 221 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 FSTP19883 344 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 BDKRB2P30411 391 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 GABARAPL2P60520 117 aa16.46■□□□□ 0.23
COL9A3-202ENST00000452372 FGF12P61328 243 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms