RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	OCM2	P0CE71	109 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	OCM	P0CE72	109 aa	Predicted RBP	7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	UBC	P0CG48	685 aa	Known RBP	7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	CALCB	P10092	127 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	DUSP1	P28562	367 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	POU3F4	P49335	361 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	BMX	P51813	675 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	UBE2E1	P51965	193 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	EDDM3B	P56851	147 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	OR12D2	P58182	307 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	COL10A1	Q03692	680 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	ZNF273	Q14593	569 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	UBE2V2	Q15819	145 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	PRR31	Q5SQ13	230 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	SLC25A26	Q70HW3	274 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	KRT74	Q7RTS7	529 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	CBR4	Q8N4T8	237 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	ZNF561	Q8N587	486 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	OR5D13	Q8NGL4	314 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	TNFRSF14	Q92956	283 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	ITFG2	Q969R8	447 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	RFT1	Q96AA3	541 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	BORCS8	Q96FH0	119 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	NRIP2	Q9BQI9	281 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	KRTAP4-2	Q9BYR5	136 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	CHST5	Q9GZS9	411 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	ZNF696	Q9H7X3	374 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	GMPPB	Q9Y5P6	360 aa		7.08	□□□□□ -1.28
RFX3-209	ENST00000451859	MEGF8	Q7Z7M0	2845 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859		A0A1B0GUS0	222 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859		A0A1W2PPH5	198 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859		J3QLW9	94 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	NOS1AP	O75052	506 aa	Predicted RBP	7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	SERPINA3	P01011	423 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	TK1	P04183	234 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	ZNF19	P17023	458 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	ZNF20	P17024	532 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	FST	P19883	344 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	MPZ	P25189	248 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	ALDH3A2	P51648	485 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	FUT6	P51993	359 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	IL24	Q13007	206 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	TMED1	Q13445	227 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	CNN3	Q15417	329 aa	Known RBP	7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	TMEM200B	Q69YZ2	307 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	HCP5	Q6MZN7	132 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	ZFP1	Q6P2D0	407 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	GDPGP1	Q6ZNW5	385 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859		Q6ZSV7	163 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	EGFL6	Q8IUX8	553 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	OR2G2	Q8NGZ5	317 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	OR10AC1	Q8NH08	325 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	LINC01006	Q8NI28	216 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	EMG1	Q92979	244 aa	Known RBP	7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	FGGY	Q96C11	551 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	ADAT3	Q96EY9	351 aa	Predicted RBP	7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	HRASLS5	Q96KN8	279 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	CEP19	Q96LK0	163 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	DMRTB1	Q96MA1	342 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	SPACA5	Q96QH8	159 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	MBOAT4	Q96T53	435 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	SSX3	Q99909	188 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	PKIB	Q9C010	78 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	CHST6	Q9GZX3	395 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	SLITRK2	Q9H156	845 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	PPA2	Q9H2U2	334 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	HES4	Q9HCC6	221 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	USE1	Q9NZ43	259 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	MTCH1	Q9NZJ7	389 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	IL36RN	Q9UBH0	155 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	SF3B6	Q9Y3B4	125 aa	Known RBP	7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	MMP24	Q9Y5R2	645 aa		7.07	□□□□□ -1.28
RFX3-209	ENST00000451859	SLC16A6	O15403	523 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	HTR1A	P08908	422 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	BCL3	P20749	454 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	AZGP1	P25311	298 aa	Known RBP	7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	NPBWR2	P48146	333 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	RBP2	P50120	134 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	MTCP1	P56278	107 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	LGALS4	P56470	323 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	NANOS3	P60323	173 aa	Known RBP	7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	KRTAP10-3	P60369	221 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	RPL15	P61313	204 aa	Known RBP	7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	ERVK11-1	P61568	191 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	ACTC1	P68032	377 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	ACTA1	P68133	377 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	ZNF91	Q05481	1191 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	ACSM1	Q08AH1	577 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	HIST2H2BD	Q6DRA6	164 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	C1orf122	Q6ZSJ8	110 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859		Q6ZSR3	168 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	GDPD3	Q7L5L3	318 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	LHFPL3	Q86UP9	236 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	ACBD7	Q8N6N7	88 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	ZNF676	Q8N7Q3	588 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	TPRX1	Q8N7U7	411 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	BEND2	Q8NDZ0	799 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	OR51A4	Q8NGJ6	313 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	OR5D18	Q8NGL1	313 aa		7.06	□□□□□ -1.28
RFX3-209	ENST00000451859	OR13C3	Q8NGS6	347 aa		7.06	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms