RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 LGALS14Q8TCE9 139 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 TNFAIP8L1Q8WVP5 186 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 FAM3DQ96BQ1 224 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 SEH1LQ96EE3 360 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 CEP19Q96LK0 163 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 TSC22D3Q99576 134 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 PKIBQ9C010 78 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 WDR13Q9H1Z4 485 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 COMMD3Q9UBI1 195 aa10.93□□□□□ -0.66
VPS33A-202ENST00000451053 CCDC168Q8NDH2 2452 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 PPIAL4EA0A075B759 164 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 IGHV3OR15-7A0A075B7D8 119 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 PPIAL4DF5H284 164 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 H7C1Q1 480 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 SPRY1O43609 319 aaPredicted RBP10.92□□□□□ -0.66
VPS33A-202ENST00000451053 PPIAL4FP0DN26 164 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 TMEM225BP0DP42 221 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 OR3A4PP47883 348 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 BMXP51813 675 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 ZP1P60852 638 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 IL24Q13007 206 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 GPR176Q14439 515 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 P2RY14Q15391 338 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 UBE2NLQ5JXB2 153 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 SFRP4Q6FHJ7 346 aaPredicted RBP10.92□□□□□ -0.66
VPS33A-202ENST00000451053 SPNS3Q6ZMD2 512 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 OR2W3Q7Z3T1 314 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 LRRC28Q86X40 367 aaPredicted RBP10.92□□□□□ -0.66
VPS33A-202ENST00000451053 MKXQ8IYA7 352 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 SAXO1Q8IYX7 474 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 POC1AQ8NBT0 407 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 DEFB108BQ8NET1 73 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 PXT1Q8NFP0 134 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 OR4D6Q8NGJ1 314 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 OR6Q1Q8NGQ2 317 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 SLAMF9Q96A28 289 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 SLC25A28Q96A46 364 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 PTX4Q96A99 478 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 CST11Q9H112 138 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 TMEM165Q9HC07 324 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 MTCH1Q9NZJ7 389 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 FBLN5Q9UBX5 448 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 POLDIP2Q9Y2S7 368 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 PPIAL4AQ9Y536 164 aa10.92□□□□□ -0.66
VPS33A-202ENST00000451053 AKAP9Q99996 3911 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 IGKV1-12A0A0C4DH73 117 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 F8VVB4 439 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 F8VWA3 439 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 LGALS8O00214 317 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 ANGPTL7O43827 346 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 IGKV1D-12P01611 117 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 APOA1P02647 267 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 PGA5P0DJD9 388 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
VPS33A-202ENST00000451053 RAB6AP20340 208 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 USF1P22415 310 aaPredicted RBP10.91□□□□□ -0.66
VPS33A-202ENST00000451053 TALDO1P37837 337 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 MDH2P40926 338 aaKnown RBP10.91□□□□□ -0.66
VPS33A-202ENST00000451053 CLDN12P56749 244 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 PDZK1IP1Q13113 114 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 RSU1Q15404 277 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 C2orf76Q3KRA6 126 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 TEX36Q5VZQ5 186 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 GLIPR1L1Q6UWM5 242 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 FAM90A1Q86YD7 464 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 SAMD12Q8N8I0 201 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 OR51D1Q8NGF3 324 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 CLDND2Q8NHS1 167 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 KCNG3Q8TAE7 436 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 S100ZQ8WXG8 99 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 RAB40AQ8WXH6 277 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 WDFY2Q96P53 400 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 NRIP2Q9BQI9 281 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 TMEM246Q9BRR3 403 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 METTL9Q9H1A3 318 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 RHOFQ9HBH0 211 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 IL36GQ9NZH8 169 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 OR5V1Q9UGF6 321 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 ING4Q9UNL4 249 aa10.91□□□□□ -0.66
VPS33A-202ENST00000451053 OOEPA6NGQ2 149 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 CTDSP2O14595 271 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 SMAD7O15105 426 aaKnown RBP10.9□□□□□ -0.66
VPS33A-202ENST00000451053 HPGDSO60760 199 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 NOS1APO75052 506 aaPredicted RBP10.9□□□□□ -0.66
VPS33A-202ENST00000451053 SCGNO76038 276 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 KDM4BO94953 1096 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 FSTL3O95633 263 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 PAHP00439 452 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 TFF1P04155 84 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 GLRA1P23415 457 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 IL2RGP31785 369 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 ERVK11-1P61568 191 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 LOXL1Q08397 574 aaPredicted RBP10.9□□□□□ -0.66
VPS33A-202ENST00000451053 LSAMPQ13449 338 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 TMEM155Q4W5P6 130 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 SPANXN2Q5MJ10 180 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 ASCL4Q6XD76 172 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 C1QL2Q7Z5L3 287 aa10.9□□□□□ -0.66
VPS33A-202ENST00000451053 OR51F2Q8NH61 342 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms