RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
SGCE-208ENST00000450385 MTCH1Q9NZJ7 389 aa13.1□□□□□ -0.31
SGCE-208ENST00000450385 FRRS1LQ9P0K9 344 aa13.1□□□□□ -0.31
SGCE-208ENST00000450385 A6NIN4 97 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 LGALS4P56470 323 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 RELBQ01201 579 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 ZNF146Q15072 292 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 ODF4Q2M2E3 257 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 TP53I3Q53FA7 332 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 DMRTC1Q5HYR2 192 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 SPIN3Q5JUX0 258 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 LPCAT4Q643R3 524 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 LIAT1Q6ZQX7 453 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 PDZD9Q8IXQ8 264 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 OR8H2Q8N162 312 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 PPP1R35Q8TAP8 253 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 UBE2FQ969M7 185 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 RNF166Q96A37 237 aaPredicted RBP13.09□□□□□ -0.31
SGCE-208ENST00000450385 S100A14Q9HCY8 104 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 C8orf4Q9NR00 106 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 RPL36Q9Y3U8 105 aaKnown RBP13.09□□□□□ -0.31
SGCE-208ENST00000450385 RNF114Q9Y508 228 aa13.09□□□□□ -0.31
SGCE-208ENST00000450385 TRBV2A0A0J9YWF9 115 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 LOC100130705A0A1B0GUX0 176 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 C17orf98A8MV24 154 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 TIMM23O14925 209 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 APOL3O95236 402 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 ZNF20P17024 532 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 GABRB1P18505 474 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 ATF1P18846 271 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 KIR3DL2P43630 455 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 MTCP1P56278 107 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 OR12D2P58182 307 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 DHRS7BQ6IAN0 325 aaPredicted RBP13.08□□□□□ -0.32
SGCE-208ENST00000450385 GDPD3Q7L5L3 318 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 PQLC1Q8N2U9 271 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 C11orf42Q8N5U0 333 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 TRMT10AQ8TBZ6 339 aaKnown RBP13.08□□□□□ -0.32
SGCE-208ENST00000450385 ZNF488Q96MN9 340 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 CITED1Q99966 193 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 OR14J1Q9UGF5 321 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 PCDHGB5Q9Y5G0 923 aa13.08□□□□□ -0.32
SGCE-208ENST00000450385 IGKV1-27A0A075B6S5 117 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 FUOMA2VDF0 154 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 TMEM212A6NML5 194 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 ANGPTL7O43827 346 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 ZNF737O75373 536 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 IGHA1P01876 353 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 ZNF728P0DKX0 622 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 OMGP23515 440 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 PEX2P28328 305 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 ERP29P30040 261 aaKnown RBP13.07□□□□□ -0.32
SGCE-208ENST00000450385 COL10A1Q03692 680 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 PDZK1IP1Q13113 114 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 ALKBH1Q13686 389 aaKnown RBP13.07□□□□□ -0.32
SGCE-208ENST00000450385 TAF9Q16594 264 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 ZIK1Q3SY52 487 aaPredicted RBP13.07□□□□□ -0.32
SGCE-208ENST00000450385 HCP5Q6MZN7 132 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 SLC25A26Q70HW3 274 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 FAM58AQ8N1B3 248 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 OR5D14Q8NGL3 314 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 OR13D1Q8NGV5 346 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 LINC01006Q8NI28 216 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 FGGYQ96C11 551 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 LGALS12Q96DT0 336 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 PELI1Q96FA3 418 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 CPNE2Q96FN4 548 aaPredicted RBP13.07□□□□□ -0.32
SGCE-208ENST00000450385 FBLN5Q9UBX5 448 aa13.07□□□□□ -0.32
SGCE-208ENST00000450385 TBL2Q9Y4P3 447 aaKnown RBP13.07□□□□□ -0.32
SGCE-208ENST00000450385 hADV38S2A0JD32 116 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 FAM90A8PA6NJQ4 464 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 OR4C45A6NMZ5 311 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 VGLL3A8MV65 326 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 H3BUI4 141 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 J3QLW9 94 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 TFF1P04155 84 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 CCDC159P0C7I6 412 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 OCM2P0CE71 109 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 OCMP0CE72 109 aaPredicted RBP13.06□□□□□ -0.32
SGCE-208ENST00000450385 DBTP11182 482 aaKnown RBP13.06□□□□□ -0.32
SGCE-208ENST00000450385 ZNF19P17023 458 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 BMXP51813 675 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 PROK1P58294 105 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 KLRD1Q13241 179 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 LRRC75BQ2VPJ9 315 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 TREML4Q6UXN2 200 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 SERPINA12Q8IW75 414 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 RDH10Q8IZV5 341 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 ZNF676Q8N7Q3 588 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 ASCC1Q8N9N2 400 aaKnown RBP13.06□□□□□ -0.32
SGCE-208ENST00000450385 FOXRED1Q96CU9 486 aaPredicted RBP13.06□□□□□ -0.32
SGCE-208ENST00000450385 MALSU1Q96EH3 234 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 ADAT3Q96EY9 351 aaPredicted RBP13.06□□□□□ -0.32
SGCE-208ENST00000450385 OPALINQ96PE5 141 aa13.06□□□□□ -0.32
SGCE-208ENST00000450385 SSX3Q99909 188 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms