RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GDPD3Q7L5L3 318 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 BEND2Q8NDZ0 799 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 DNAAF1Q8NEP3 725 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 EMG1Q92979 244 aaKnown RBP12.47□□□□□ -0.41
CHD3-205ENST00000449744 FGGYQ96C11 551 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 Q96MT0 163 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 MBOAT4Q96T53 435 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 FRRS1LQ9P0K9 344 aa12.47□□□□□ -0.41
CHD3-205ENST00000449744 EXOGQ9Y2C4 368 aaKnown RBP12.47□□□□□ -0.41
CHD3-205ENST00000449744 MGAM2Q2M2H8 2515 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 J3QRE1 110 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 K7N7A8 449 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 ISG15P05161 165 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 CCL3L1P16619 93 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 ATF1P18846 271 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 COX7A1P24310 79 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 AZGP1P25311 298 aaKnown RBP12.46□□□□□ -0.41
CHD3-205ENST00000449744 TGFBR2P37173 567 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 POU3F4P49335 361 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 CCR9P51686 369 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 MTCP1P56278 107 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 LGALS4P56470 323 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 EDDM3BP56851 147 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 ZNF273Q14593 569 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 HCP5Q6MZN7 132 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 FDX2Q6P4F2 183 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 TREML4Q6UXN2 200 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 ZBTB49Q6ZSB9 765 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 Q8IYB0 196 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 LINC01006Q8NI28 216 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 LGALS12Q96DT0 336 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 ADAT3Q96EY9 351 aaPredicted RBP12.46□□□□□ -0.41
CHD3-205ENST00000449744 C4orf36Q96KX1 117 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 S100A14Q9HCY8 104 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 AASSQ9UDR5 926 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 HHLA2Q9UM44 414 aa12.46□□□□□ -0.41
CHD3-205ENST00000449744 E9PQ18 207 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 F8VVB4 439 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 F8VWA3 439 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 H3BUX3 64 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 NANOS3P60323 173 aaKnown RBP12.45□□□□□ -0.42
CHD3-205ENST00000449744 ZNF91Q05481 1191 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 SRSF4Q08170 494 aaKnown RBP12.45□□□□□ -0.42
CHD3-205ENST00000449744 ZNF782Q6ZMW2 699 aaPredicted RBP12.45□□□□□ -0.42
CHD3-205ENST00000449744 Q6ZSV7 163 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 LHFPL2Q6ZUX7 228 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 UTS2BQ765I0 119 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 ENTHD1Q8IYW4 607 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 ZNF676Q8N7Q3 588 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 ZSCAN4Q8NAM6 433 aaPredicted RBP12.45□□□□□ -0.42
CHD3-205ENST00000449744 OR13C3Q8NGS6 347 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 RNF166Q96A37 237 aaPredicted RBP12.45□□□□□ -0.42
CHD3-205ENST00000449744 SPSB1Q96BD6 273 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 SNX22Q96L94 193 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 SSX3Q99909 188 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 ALG8Q9BVK2 526 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 PPA2Q9H2U2 334 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 NEK6Q9HC98 313 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 GLS2Q9UI32 602 aa12.45□□□□□ -0.42
CHD3-205ENST00000449744 IGKV1-9A0A0C4DH69 117 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 ZNF737O75373 536 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 FADS2O95864 444 aaKnown RBP12.44□□□□□ -0.42
CHD3-205ENST00000449744 HAND1O96004 215 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 DBTP11182 482 aaKnown RBP12.44□□□□□ -0.42
CHD3-205ENST00000449744 GABRB1P18505 474 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 ALKBH1Q13686 389 aaKnown RBP12.44□□□□□ -0.42
CHD3-205ENST00000449744 GALEQ14376 348 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 LRRC75BQ2VPJ9 315 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 LHFPL3Q86UP9 236 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 OR8H2Q8N162 312 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 FAM58AQ8N1B3 248 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 PQLC1Q8N2U9 271 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 C11orf42Q8N5U0 333 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 C17orf50Q8WW18 174 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 PELI1Q96FA3 418 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 OPALINQ96PE5 141 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 SLC29A1Q99808 456 aa12.44□□□□□ -0.42
CHD3-205ENST00000449744 TRBV2A0A0J9YWF9 115 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 LOC100130705A0A1B0GUX0 176 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 hADV38S2A0JD32 116 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 C17orf98A8MV24 154 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 TIMM23O14925 209 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 CLPXO76031 633 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 BAG2O95816 211 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 RPSAP08865 295 aaKnown RBP12.43□□□□□ -0.42
CHD3-205ENST00000449744 ZNF728P0DKX0 622 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 BCL3P20749 454 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 GABRR1P24046 479 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 PEX2P28328 305 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 BMXP51813 675 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 SNU13P55769 128 aaKnown RBP12.43□□□□□ -0.42
CHD3-205ENST00000449744 EDDM3AQ14507 147 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 LY6EQ16553 131 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 SYS1Q8N2H4 156 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 OR13D1Q8NGV5 346 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 RHOXF1Q8NHV9 184 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 PPP1R35Q8TAP8 253 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 CITED1Q99966 193 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 MEGF9Q9H1U4 602 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 C16orf95Q9H693 158 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms