RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 PAPOLGQ9BWT3 736 aaKnown RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 BIN3Q9NQY0 253 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 V9GYS6 101 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 A0A0J9YW62 118 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 SNRNP70P08621 437 aaKnown RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 ACAA1P09110 424 aaPredicted RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 SULT1A2P50226 295 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 PIGYQ3MUY2 71 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 YRDCQ86U90 279 aaKnown RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 C14orf79Q96F83 325 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 EIF5A2Q9GZV4 153 aaKnown RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 PPP1R14DQ9NXH3 145 aa11.25□□□□□ -0.61
SHC1-210ENST00000448116 COL5A1P20908 1838 aaPredicted RBP11.25□□□□□ -0.61
SHC1-210ENST00000448116 ADAMTS9Q9P2N4 1935 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 FOXI3A8MTJ6 420 aaPredicted RBP11.24□□□□□ -0.61
SHC1-210ENST00000448116 DEDDO75618 318 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 JTBO76095 146 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
SHC1-210ENST00000448116 FHITP49789 147 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 SURF2Q15527 256 aaPredicted RBP11.24□□□□□ -0.61
SHC1-210ENST00000448116 C10orf91Q5T1B1 145 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 MEX3BQ6ZN04 569 aaKnown RBP11.24□□□□□ -0.61
SHC1-210ENST00000448116 HSD17B11Q8NBQ5 300 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 RHBDD1Q8TEB9 315 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 NABP1Q96AH0 204 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 Q96M66 194 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 TM2D1Q9BX74 207 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 M0R036 132 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 GEMIN2O14893 280 aaKnown RBP11.24□□□□□ -0.61
SHC1-210ENST00000448116 C1QL1O75973 258 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 B4GALT1P15291 398 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 F2RL1P55085 397 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 CFAP161Q6P656 301 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 SLC22A25Q6T423 547 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 OPN5Q6U736 354 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 PLXDC2Q6UX71 529 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 FBXL14Q8N1E6 418 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 ALKBH3Q96Q83 286 aaPredicted RBP11.24□□□□□ -0.61
SHC1-210ENST00000448116 AMDHD2Q9Y303 409 aa11.24□□□□□ -0.61
SHC1-210ENST00000448116 MEX3AA1L020 520 aaKnown RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 CRYM-AS1A6NIL9 109 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 TOX3O15405 576 aaPredicted RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 EIF1BO60739 113 aaKnown RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 H2AFB1P0C5Y9 115 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 DAOP14920 347 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 CTSSP25774 331 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 CXCL12P48061 93 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 SSX2Q16385 188 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 ZNF385CQ66K41 422 aaPredicted RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 ETFRF1Q6IPR1 90 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 OR11L1Q8NGX0 322 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 NECAP2Q9NVZ3 263 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 COA4Q9NYJ1 87 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 VPS13AQ96RL7 3174 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 SLC33A1O00400 549 aaPredicted RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 TERTO14746 1132 aaKnown RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 MBPP02686 304 aaPredicted RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 CBR1P16152 277 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 ITGA3P26006 1051 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 HTR5AP47898 357 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 CAMLGP49069 296 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 NOVA1P51513 510 aaKnown RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 ZNF133P52736 654 aaPredicted RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 H3F3AP84243 136 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 PCOLCEQ15113 449 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 MIDNQ504T8 468 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 SLC16A14Q7RTX9 510 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 SPEM1Q8N4L4 309 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 GLYATL2Q8WU03 294 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 PIGCQ92535 297 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 MARS2Q96GW9 593 aaKnown RBP11.23□□□□□ -0.61
SHC1-210ENST00000448116 CLCC1Q96S66 551 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 IGKV1-27A0A075B6S5 117 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 GPR37O15354 613 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 ZIC3O60481 467 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 IGHV3-9P01782 118 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 FCGR3AP08637 254 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 ALDH3B1P43353 468 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 BTNL8Q6UX41 500 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 TMEM54Q969K7 222 aa11.23□□□□□ -0.61
SHC1-210ENST00000448116 LOC102725191A0A1B0GVB3 256 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 MSTNO14793 375 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 HOXA1P49639 335 aaPredicted RBP11.22□□□□□ -0.61
SHC1-210ENST00000448116 RBP2P50120 134 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 TGIF1Q15583 401 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 ZNF528Q3MIS6 628 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 C10orf128Q5T292 105 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 TMEM268Q5VZI3 342 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 ZNF442Q9H7R0 627 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 EXPH5Q8NEV8 1989 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 CCDC187A0A096LP49 1063 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 PHF1O43189 567 aaPredicted RBP11.22□□□□□ -0.61
SHC1-210ENST00000448116 F10P00742 488 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 LIFP15018 202 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 ZNF32P17041 273 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 EPHA8P29322 1005 aaPredicted RBP11.22□□□□□ -0.61
SHC1-210ENST00000448116 SSR4P51571 173 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 HGFACQ04756 655 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 RTL6Q6ICC9 239 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms