RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 C17orf107Q6ZR85 190 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 MFSD4AQ8N468 514 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 FADS6Q8N9I5 356 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 OR5T1Q8NG75 326 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 OR1K1Q8NGR3 316 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 RAB1CQ92928 201 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 RBMXL1Q96E39 390 aaKnown RBP6.47□□□□□ -1.37
SYNE1-213ENST00000448038 FYTTD1Q96QD9 318 aaKnown RBP6.47□□□□□ -1.37
SYNE1-213ENST00000448038 PECRQ9BY49 303 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 MS4A5Q9H3V2 200 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 KIAA1456Q9P272 454 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 ONECUT1Q9UBC0 465 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 LSM2Q9Y333 95 aaKnown RBP6.47□□□□□ -1.37
SYNE1-213ENST00000448038 TRAV38-1A0A0B4J264 116 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 GPR31O00270 319 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 SOCS1O15524 211 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 IGHMP01871 453 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 OR8U8P0C7N1 319 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 CEACAM6P40199 344 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 UCP2P55851 309 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 NKX6-1P78426 367 aaPredicted RBP6.47□□□□□ -1.37
SYNE1-213ENST00000448038 TLE1Q04724 770 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 NHLRC1Q6VVB1 395 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 SUN5Q8TC36 379 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 SLC39A7Q92504 469 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 UNKLQ9H9P5 680 aaKnown RBP6.47□□□□□ -1.37
SYNE1-213ENST00000448038 MLXQ9UH92 298 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 ERRFI1Q9UJM3 462 aaPredicted RBP6.47□□□□□ -1.37
SYNE1-213ENST00000448038 FAM96BQ9Y3D0 163 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 ARID1AO14497 2285 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 TRIM64BA6NI03 449 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 GEMIN2O14893 280 aaKnown RBP6.47□□□□□ -1.37
SYNE1-213ENST00000448038 KLF4O43474 513 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 HPNP05981 417 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 GNB1P62873 340 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 TMEM128Q5BJH2 165 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 OR52B4Q8NGK2 314 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 OR1S2Q8NGQ3 325 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 FBXW5Q969U6 566 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 PIK3IP1Q96FE7 263 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 MAP6Q96JE9 813 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 PIGMQ9H3S5 423 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 NEUROG3Q9Y4Z2 214 aa6.47□□□□□ -1.37
SYNE1-213ENST00000448038 NPIPB13A6NJU9 1138 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 DEFB108AA8MXU0 73 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 NPIPB4C9JG80 1138 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 C17orf112F2Z3M2 114 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF205O95201 554 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 TUBG1P23258 451 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 S100A11P31949 105 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 DHODHQ02127 395 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 FAM122BQ7Z309 247 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 SHISA5Q8N114 240 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 GVQW1Q8N7I0 195 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 TMPRSS13Q9BYE2 586 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 HRH4Q9H3N8 390 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 CSAG2Q9Y5P2 127 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 POM121CA8CG34 1229 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 ADAM11O75078 769 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 SEMA7AO75326 666 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 FOXO1Q12778 655 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 PDZK1IP1Q13113 114 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF266Q14584 549 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 LINC01590Q5TEZ4 76 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF626Q68DY1 528 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 OR13C8Q8NGS7 320 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 MRGPRDQ8TDS7 321 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 SSUH2Q9Y2M2 353 aa6.46□□□□□ -1.37
SYNE1-213ENST00000448038 hADV38S2A0JD32 116 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 TMPRSS2O15393 492 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 CD1AP06126 327 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 GNG10P50151 68 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 HSD17B11Q8NBQ5 300 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 TRMT61AQ96FX7 289 aaKnown RBP6.46□□□□□ -1.38
SYNE1-213ENST00000448038 CNTNAP3BQ96NU0 1288 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 FAM212BQ9NTI7 297 aaPredicted RBP6.46□□□□□ -1.38
SYNE1-213ENST00000448038 SEMA5BQ9P283 1151 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 RNF7Q9UBF6 113 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 BOLA1Q9Y3E2 137 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 M0R1X1 148 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 SPNP16150 400 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 ADRA2CP18825 462 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 OR3A1P47881 315 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 ZNF816Q0VGE8 651 aaPredicted RBP6.46□□□□□ -1.38
SYNE1-213ENST00000448038 S100A7AQ86SG5 101 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 ZNF75AQ96N20 296 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 TAAR6Q96RI8 345 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 LAMP3Q9UQV4 416 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 RAXQ9Y2V3 346 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 AQP7O14520 342 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 NDUFB6O95139 128 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 HAND1O96004 215 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 HOXB1P14653 301 aaPredicted RBP6.46□□□□□ -1.38
SYNE1-213ENST00000448038 FPR2P25090 351 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 KCNJ3P48549 501 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 TRAT1Q6PIZ9 186 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 C1orf174Q8IYL3 243 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 RBMXL3Q8N7X1 1067 aaKnown RBP6.46□□□□□ -1.38
SYNE1-213ENST00000448038 WDR13Q9H1Z4 485 aa6.46□□□□□ -1.38
SYNE1-213ENST00000448038 ZNF552Q9H707 407 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms