RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 AKR1C3P42330 323 aa16.59■□□□□ 0.25
SDCBP-204ENST00000447182 UCP3P55916 312 aa16.59■□□□□ 0.25
SDCBP-204ENST00000447182 CLEC9AQ6UXN8 241 aa16.59■□□□□ 0.25
SDCBP-204ENST00000447182 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
SDCBP-204ENST00000447182 SPACA1Q9HBV2 294 aa16.59■□□□□ 0.25
SDCBP-204ENST00000447182 ZDHHC8Q9ULC8 765 aa16.59■□□□□ 0.25
SDCBP-204ENST00000447182 CA14Q9ULX7 337 aa16.59■□□□□ 0.25
SDCBP-204ENST00000447182 SPRY1O43609 319 aaPredicted RBP16.58■□□□□ 0.25
SDCBP-204ENST00000447182 DIRAS3O95661 229 aa16.58■□□□□ 0.25
SDCBP-204ENST00000447182 SNRNP70P08621 437 aaKnown RBP16.58■□□□□ 0.25
SDCBP-204ENST00000447182 GLP1RP43220 463 aa16.58■□□□□ 0.25
SDCBP-204ENST00000447182 CHAF1BQ13112 559 aa16.58■□□□□ 0.25
SDCBP-204ENST00000447182 RAB35Q15286 201 aa16.58■□□□□ 0.25
SDCBP-204ENST00000447182 LGI3Q8N145 548 aa16.58■□□□□ 0.25
SDCBP-204ENST00000447182 ZIC4Q8N9L1 334 aa16.58■□□□□ 0.25
SDCBP-204ENST00000447182 MARS2Q96GW9 593 aaKnown RBP16.58■□□□□ 0.25
SDCBP-204ENST00000447182 SYT3Q9BQG1 590 aa16.58■□□□□ 0.25
SDCBP-204ENST00000447182 ULBP2Q9BZM5 246 aa16.58■□□□□ 0.25
SDCBP-204ENST00000447182 EIF5A2Q9GZV4 153 aaKnown RBP16.58■□□□□ 0.25
SDCBP-204ENST00000447182 NXT1Q9UKK6 140 aaKnown RBP16.58■□□□□ 0.25
SDCBP-204ENST00000447182 A0A1B0GW64 132 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 ST8SIA3O43173 380 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 GLAP06280 429 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 S100A6P06703 90 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 RBP2P50120 134 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 RHEBQ15382 184 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 RSPO4Q2I0M5 234 aaPredicted RBP16.58■□□□□ 0.24
SDCBP-204ENST00000447182 MRPL14Q6P1L8 145 aaKnown RBP16.58■□□□□ 0.24
SDCBP-204ENST00000447182 LHFPL2Q6ZUX7 228 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 C20orf196Q8IYI0 205 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 REEP6Q96HR9 211 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 IP6K3Q96PC2 410 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 UCN2Q96RP3 112 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF581Q9P0T4 197 aa16.58■□□□□ 0.24
SDCBP-204ENST00000447182 METTL1Q9UBP6 276 aaKnown RBP16.58■□□□□ 0.24
SDCBP-204ENST00000447182 CCDC187A0A096LP49 1063 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 NSG1A0A0A6YYJ2 146 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 IGHV3-15A0A0B4J1V0 119 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 FAM230AA0A1W2PPH8 454 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 XRCC2O43543 280 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 SYNGR3O43761 229 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 FBXW12Q6X9E4 464 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 LFNGQ8NES3 379 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 OR10AD1Q8NGE0 317 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 MOB3AQ96BX8 217 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 GNRHR2Q96P88 292 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 PBDC1Q9BVG4 233 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 SEBOXQ9HB31 216 aaPredicted RBP16.57■□□□□ 0.24
SDCBP-204ENST00000447182 TMED3Q9Y3Q3 217 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 M0R036 132 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 SGCEO43556 437 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 FHITP49789 147 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 DSCR4P56555 118 aaPredicted RBP16.57■□□□□ 0.24
SDCBP-204ENST00000447182 PCOLCEQ15113 449 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 TSPO2Q5TGU0 170 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 TMEM42Q69YG0 159 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 OR52M1Q8NGK5 317 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 OR1J1Q8NGS3 322 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 OR2AE1Q8NHA4 323 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 SNIP1Q8TAD8 396 aaKnown RBP16.57■□□□□ 0.24
SDCBP-204ENST00000447182 NTNG2Q96CW9 530 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 MALSU1Q96EH3 234 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 SLC35B3Q9H1N7 401 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 IL36GQ9NZH8 169 aa16.57■□□□□ 0.24
SDCBP-204ENST00000447182 UMAD1C9J7I0 102 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 LIFP15018 202 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 RAB5AP20339 215 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 FXYD4P59646 89 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 PHLDA2Q53GA4 152 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 SLC22A25Q6T423 547 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 OR4D5Q8NGN0 318 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF837Q96EG3 531 aaPredicted RBP16.56■□□□□ 0.24
SDCBP-204ENST00000447182 BORCS8Q96FH0 119 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 RSRP1Q9BUV0 290 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 SMDT1Q9H4I9 107 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 BCO1Q9HAY6 547 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF286AQ9HBT8 521 aa16.56■□□□□ 0.24
SDCBP-204ENST00000447182 IGHV5-10-1A0A0J9YXX1 117 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 A0A1W2PQM1 296 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 GEMIN2O14893 280 aaKnown RBP16.55■□□□□ 0.24
SDCBP-204ENST00000447182 ZIC3O60481 467 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 S100A9P06702 114 aaKnown RBP16.55■□□□□ 0.24
SDCBP-204ENST00000447182 RAET1LQ5VY80 246 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 GPR137CQ8N3F9 429 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF251Q9BRH9 671 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 TCEAL7Q9BRU2 100 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 SH3BGRL3Q9H299 93 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 LOC102723996A0A087X1L8 192 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 A0A1W2PPH5 198 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 A6NLC8 198 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 K7N7A8 449 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 ZNF205O95201 554 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 IGHV2-5P01817 119 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 PRH1P02810 166 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 CST2P09228 141 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 NHLH2Q02577 135 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 OR8B8Q15620 311 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 KRTAP27-1Q3LI81 207 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 PPP1R3BQ86XI6 285 aa16.55■□□□□ 0.24
SDCBP-204ENST00000447182 OSR2Q8N2R0 312 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms