RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 MED21Q13503 144 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 CCDC58Q4VC31 144 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 C6orf141Q5SZD1 244 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 METTL11BQ5VVY1 283 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 PDZD9Q8IXQ8 264 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 PARP16Q8N5Y8 322 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 SIGLECL1Q8N7X8 197 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 LY6G5BQ8NDX9 201 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 OR51A2Q8NGJ7 313 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 HAVCR2Q8TDQ0 301 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 TMEM158Q8WZ71 300 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
HDAC4-204ENST00000446876 SPSB1Q96BD6 273 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 ORAI1Q96D31 301 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 SMIM19Q96E16 107 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 ZNF48Q96MX3 618 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-204ENST00000446876 NKX3-1Q99801 234 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-204ENST00000446876 MS4A7Q9GZW8 240 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-204ENST00000446876 CNTD2Q9H8S5 307 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 ESM1Q9NQ30 184 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 TAS2R4Q9NYW5 299 aa12.23□□□□□ -0.45
HDAC4-204ENST00000446876 IGKV1-12A0A0C4DH73 117 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 MDFIC2A0A1B0GVS7 189 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 MYL12BO14950 172 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 SULT1B1O43704 296 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 KNG1P01042 644 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 IGKV1D-12P01611 117 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 LIPFP07098 398 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 HCKP08631 526 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 FPR2P25090 351 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 CAV3P56539 151 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 HILS1P60008 231 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 PDZK1IP1Q13113 114 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 DMKNQ6E0U4 476 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-204ENST00000446876 VMO1Q7Z5L0 202 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 SERPINA12Q8IW75 414 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 GPR148Q8TDV2 347 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 C19orf24Q9BVV8 132 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 SUCNR1Q9BXA5 334 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 NEK6Q9HC98 313 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-204ENST00000446876 ZNF281Q9Y2X9 895 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 COL6A5A8TX70 2615 aa12.22□□□□□ -0.45
HDAC4-204ENST00000446876 A0A1W2PQ09 198 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 PTGES3LE9PB15 166 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 GPR37O15354 613 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 MT-ND2P03891 347 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 CDK1P06493 297 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 RPSAP08865 295 aaKnown RBP12.21□□□□□ -0.45
HDAC4-204ENST00000446876 MYF6P23409 242 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 DUSP1P28562 367 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 COL10A1Q03692 680 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 C11orf91Q3C1V1 193 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 MKXQ8IYA7 352 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 FAM185AQ8N0U4 392 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 ZNF561Q8N587 486 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.21□□□□□ -0.45
HDAC4-204ENST00000446876 ASCC1Q8N9N2 400 aaKnown RBP12.21□□□□□ -0.45
HDAC4-204ENST00000446876 OR5D14Q8NGL3 314 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 C8orf46Q8TAG6 207 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 GHSRQ92847 366 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 LHX4Q969G2 390 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 PGLYRP3Q96LB9 341 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 DUX5Q96PT3 197 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 VCX3BQ9H321 246 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 SIRT7Q9NRC8 400 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 C19orf12Q9NSK7 152 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 PCDHGB5Q9Y5G0 923 aa12.21□□□□□ -0.45
HDAC4-204ENST00000446876 DSCAML1Q8TD84 2053 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 MEX3AA1L020 520 aaKnown RBP12.2□□□□□ -0.46
HDAC4-204ENST00000446876 CYB5AP00167 134 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 PRKACAP17612 351 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 WNT4P56705 351 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 ZP1P60852 638 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 KLRD1Q13241 179 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 TUSC1Q2TAM9 212 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 GPR157Q5UAW9 335 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 USP43Q70EL4 1123 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 FAM58AQ8N1B3 248 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 Q8N7P7 452 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 NANOGP1Q8N7R0 232 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 ZDHHC22Q8N966 263 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 OR4M1Q8NGD0 313 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 ANKRD60Q9BZ19 345 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 KPTNQ9Y664 436 aa12.2□□□□□ -0.46
HDAC4-204ENST00000446876 A0A0A6YYJ9 748 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 TRBV5-5A0A0J9YX44 114 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 TMEM82A0PJX8 343 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 HAND1O96004 215 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 TK1P04183 234 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 RAB3AP20336 220 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 RPS11P62280 158 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDAC4-204ENST00000446876 RIPK1Q13546 671 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 KISS1Q15726 138 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 ZNF529Q6P280 563 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 C9orf139Q6ZV77 190 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 SATL1Q86VE3 508 aa12.19□□□□□ -0.46
HDAC4-204ENST00000446876 OR52N4Q8NGI2 321 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms