RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MFSD2BA6NFX1 497 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 FAM74A3Q4VXF1 159 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 TMEM196Q5HYL7 178 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 OR10G8Q8NGN5 311 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 KTI12Q96EK9 354 aaPredicted RBP16.6■□□□□ 0.25
SHANK3-203ENST00000445220 C5orf49A4QMS7 147 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 MRGPREQ86SM8 312 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 ADAT1Q9BUB4 502 aaKnown RBP16.6■□□□□ 0.25
SHANK3-203ENST00000445220 GHITMQ9H3K2 345 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.6■□□□□ 0.25
SHANK3-203ENST00000445220 PAM16Q9Y3D7 125 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 CDC14BO60729 498 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 CYC1P08574 325 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 CXCL2P19875 107 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 NOXO1Q8NFA2 376 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 PATE1Q8WXA2 126 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 MCHR2Q969V1 340 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 LANCL1O43813 399 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 SEC11BP0C7V7 166 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 NDUFB7P17568 137 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 HLA-GP17693 338 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 PCP4P48539 62 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 NAAAQ02083 359 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 FBXO17Q96EF6 278 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 SMDT1Q9H4I9 107 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 CA10Q9NS85 328 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 TIMM9Q9Y5J7 89 aa16.6■□□□□ 0.25
SHANK3-203ENST00000445220 ZNF718Q3SXZ3 478 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 MRPS2Q9Y399 296 aaKnown RBP16.59■□□□□ 0.25
SHANK3-203ENST00000445220 A6NDN8 102 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 STAG3L2P0CL84 134 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 BHLHA9Q7RTU4 235 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 TWSG1Q9GZX9 223 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 LAMB2P55268 1798 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 EPPINO95925 133 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 OR2M7Q8NG81 312 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 RPS4Y2Q8TD47 263 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 IP6K3Q96PC2 410 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 A0A1B0GTH9 108 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 F12P00748 615 aaPredicted RBP16.59■□□□□ 0.25
SHANK3-203ENST00000445220 HTR1DP28221 377 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 FOXO1Q12778 655 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 THSD4Q6ZMP0 1018 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 CNTD2Q9H8S5 307 aa16.59■□□□□ 0.25
SHANK3-203ENST00000445220 DYNLT3P51808 116 aa16.58■□□□□ 0.25
SHANK3-203ENST00000445220 C21orf58P58505 322 aa16.58■□□□□ 0.25
SHANK3-203ENST00000445220 HIST3H3Q16695 136 aa16.58■□□□□ 0.25
SHANK3-203ENST00000445220 LIAT1Q6ZQX7 453 aa16.58■□□□□ 0.25
SHANK3-203ENST00000445220 TMEM147Q9BVK8 224 aa16.58■□□□□ 0.25
SHANK3-203ENST00000445220 NEU3Q9UQ49 428 aa16.58■□□□□ 0.25
SHANK3-203ENST00000445220 DOCK1Q14185 1865 aa16.58■□□□□ 0.25
SHANK3-203ENST00000445220 LILRA5A6NI73 299 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 OR2J3O76001 311 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 DDTP30046 118 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 SUMO3P55854 103 aaPredicted RBP16.58■□□□□ 0.24
SHANK3-203ENST00000445220 POLR2GP62487 172 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHANK3-203ENST00000445220 RHOBP62745 196 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 BCL2L2Q92843 193 aaPredicted RBP16.58■□□□□ 0.24
SHANK3-203ENST00000445220 TBX15Q96SF7 602 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 C12orf49Q9H741 205 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 CACNG5Q9UF02 275 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 HES1Q14469 280 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 POM121L2Q96KW2 1035 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 ALX4Q9H161 411 aaPredicted RBP16.58■□□□□ 0.24
SHANK3-203ENST00000445220 LINC00696Q6ZRV3 163 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 THOC3Q96J01 351 aaKnown RBP16.58■□□□□ 0.24
SHANK3-203ENST00000445220 HDGFL3Q9Y3E1 203 aa16.58■□□□□ 0.24
SHANK3-203ENST00000445220 NKX2-2O95096 273 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 LILRA6Q6PI73 481 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 C6orf15Q6UXA7 325 aaPredicted RBP16.57■□□□□ 0.24
SHANK3-203ENST00000445220 TMEM251Q8N6I4 163 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 ZNF738Q8NE65 137 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 BLNKQ8WV28 456 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 ZNF385CQ66K41 422 aaPredicted RBP16.57■□□□□ 0.24
SHANK3-203ENST00000445220 ACSM6Q6P461 480 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 C6orf201Q7Z4U5 140 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 DECR2Q9NUI1 292 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 DCAF16Q9NXF7 216 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 TRIOBPQ9H2D6 2365 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 A0A1W2PPC1 479 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 CDC42EP2O14613 210 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 SEMA7AO75326 666 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 FAM87AP0C7U9 286 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 CCL4L1Q8NHW4 92 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 MRPS24Q96EL2 167 aaKnown RBP16.57■□□□□ 0.24
SHANK3-203ENST00000445220 LRFN3Q9BTN0 628 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 FAAP24Q9BTP7 215 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 NUP205Q92621 2012 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 ZNF880Q6PDB4 577 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 OR51B4Q9Y5P0 310 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 DMRT1Q9Y5R6 373 aa16.57■□□□□ 0.24
SHANK3-203ENST00000445220 SPEM1Q8N4L4 309 aa16.56■□□□□ 0.24
SHANK3-203ENST00000445220 TRBV5-3A0A0A0MS03 114 aa16.56■□□□□ 0.24
SHANK3-203ENST00000445220 VN1R17PQ8TDU5 208 aa16.56■□□□□ 0.24
SHANK3-203ENST00000445220 ACY3Q96HD9 319 aa16.56■□□□□ 0.24
SHANK3-203ENST00000445220 SIAH2O43255 324 aa16.56■□□□□ 0.24
SHANK3-203ENST00000445220 HLA-BQ31612 363 aa16.56■□□□□ 0.24
SHANK3-203ENST00000445220 MRGPRGQ86SM5 289 aa16.56■□□□□ 0.24
SHANK3-203ENST00000445220 MS4A3Q96HJ5 214 aa16.56■□□□□ 0.24
SHANK3-203ENST00000445220 NRG2O14511 850 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms