RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 FDX2Q6P4F2 183 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 LHFPL3Q86UP9 236 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 ENTHD1Q8IYW4 607 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 ZNF676Q8N7Q3 588 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 OR13C3Q8NGS6 347 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 STMN2Q93045 179 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 RNF166Q96A37 237 aaPredicted RBP16.42■□□□□ 0.22
LRCH3-208ENST00000443727 ADAT3Q96EY9 351 aaPredicted RBP16.42■□□□□ 0.22
LRCH3-208ENST00000443727 ALG8Q9BVK2 526 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 SLITRK2Q9H156 845 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 HEXA-AS1Q9H8Q6 139 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 HHLA2Q9UM44 414 aa16.42■□□□□ 0.22
LRCH3-208ENST00000443727 LOC100130705A0A1B0GUX0 176 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 ISG15P05161 165 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 CHRM2P08172 466 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 DBTP11182 482 aaKnown RBP16.41■□□□□ 0.22
LRCH3-208ENST00000443727 ATF1P18846 271 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 POU3F4P49335 361 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 CCR9P51686 369 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 RELBQ01201 579 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 OLFML2AQ68BL7 652 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 MKXQ8IYA7 352 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 Q8IYB0 196 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 DNAAF1Q8NEP3 725 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 EMG1Q92979 244 aaKnown RBP16.41■□□□□ 0.22
LRCH3-208ENST00000443727 PELI1Q96FA3 418 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 AMBNQ9NP70 447 aa16.41■□□□□ 0.22
LRCH3-208ENST00000443727 CLPSL1A2RUU4 121 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 F8VVB4 439 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 F8VWA3 439 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 K7N7A8 449 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 GABRB1P18505 474 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 AZGP1P25311 298 aaKnown RBP16.4■□□□□ 0.22
LRCH3-208ENST00000443727 EDDM3BP56851 147 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 GALEQ14376 348 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 TAF9Q16594 264 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 MIDNQ504T8 468 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 DHRS7BQ6IAN0 325 aaPredicted RBP16.4■□□□□ 0.22
LRCH3-208ENST00000443727 UTS2BQ765I0 119 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 GDPD3Q7L5L3 318 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 ZNF555Q8NEP9 628 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 OR5R1Q8NH85 324 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 RHOXF1Q8NHV9 184 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 FAM118AQ9NWS6 357 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 VPREB3Q9UKI3 123 aa16.4■□□□□ 0.22
LRCH3-208ENST00000443727 MGAM2Q2M2H8 2515 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 CCL3L1P16619 93 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 COX7A1P24310 79 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 ERVFRD-1P60508 538 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 RAB40BQ12829 278 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 ALKBH1Q13686 389 aaKnown RBP16.39■□□□□ 0.21
LRCH3-208ENST00000443727 PRR31Q5SQ13 230 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 HCP5Q6MZN7 132 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 LHFPL2Q6ZUX7 228 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 SPSB1Q96BD6 273 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 ZNF696Q9H7X3 374 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 NEK6Q9HC98 313 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 INPP5EQ9NRR6 644 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 MYRFQ9Y2G1 1151 aa16.39■□□□□ 0.21
LRCH3-208ENST00000443727 RPL36Q9Y3U8 105 aaKnown RBP16.39■□□□□ 0.21
LRCH3-208ENST00000443727 IGKV1-9A0A0C4DH69 117 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 GABRR1P24046 479 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 LGALS4P56470 323 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 EDDM3AQ14507 147 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 ZNF273Q14593 569 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 ZNF782Q6ZMW2 699 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-208ENST00000443727 FAM58AQ8N1B3 248 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 SYS1Q8N2H4 156 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 ZSCAN4Q8NAM6 433 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-208ENST00000443727 BEND2Q8NDZ0 799 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 OR51A4Q8NGJ6 313 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 OR10AC1Q8NH08 325 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 WFDC12Q8WWY7 111 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 OPALINQ96PE5 141 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 ISG20L2Q9H9L3 353 aaKnown RBP16.38■□□□□ 0.21
LRCH3-208ENST00000443727 RBFOX1Q9NWB1 397 aaKnown RBP16.38■□□□□ 0.21
LRCH3-208ENST00000443727 GLS2Q9UI32 602 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 RNF114Q9Y508 228 aa16.38■□□□□ 0.21
LRCH3-208ENST00000443727 OR4C45A6NMZ5 311 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 ZNF737O75373 536 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 HAND1O96004 215 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 RPSAP08865 295 aaKnown RBP16.37■□□□□ 0.21
LRCH3-208ENST00000443727 PRKACAP17612 351 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 BCL3P20749 454 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 SNU13P55769 128 aaKnown RBP16.37■□□□□ 0.21
LRCH3-208ENST00000443727 MRPL28Q13084 256 aaKnown RBP16.37■□□□□ 0.21
LRCH3-208ENST00000443727 ZSCAN26Q16670 478 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 KLHL22Q53GT1 634 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 BRICD5Q6PL45 260 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 OR8H2Q8N162 312 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 OR13C9Q8NGT0 318 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 C17orf50Q8WW18 174 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 RFT1Q96AA3 541 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 SNX22Q96L94 193 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 COMMD4Q9H0A8 199 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 ERVK13-1Q9NX77 482 aa16.37■□□□□ 0.21
LRCH3-208ENST00000443727 SMPD3Q9NY59 655 aaPredicted RBP16.37■□□□□ 0.21
LRCH3-208ENST00000443727 TRBV2A0A0J9YWF9 115 aa16.36■□□□□ 0.21
LRCH3-208ENST00000443727 MEX3AA1L020 520 aaKnown RBP16.36■□□□□ 0.21
LRCH3-208ENST00000443727 H3BUX3 64 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms