RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 RPEQ96AT9 228 aa5.11□□□□□ -1.59
SSXP3-201ENST00000442971 KIRREL1Q96J84 757 aa5.11□□□□□ -1.59
SSXP3-201ENST00000442971 COQ7Q99807 217 aa5.11□□□□□ -1.59
SSXP3-201ENST00000442971 NRIP2Q9BQI9 281 aa5.11□□□□□ -1.59
SSXP3-201ENST00000442971 TMEM43Q9BTV4 400 aa5.11□□□□□ -1.59
SSXP3-201ENST00000442971 ARMC7Q9H6L4 198 aa5.11□□□□□ -1.59
SSXP3-201ENST00000442971 WDR55Q9H6Y2 383 aaPredicted RBP5.11□□□□□ -1.59
SSXP3-201ENST00000442971 ERVK13-1Q9NX77 482 aa5.11□□□□□ -1.59
SSXP3-201ENST00000442971 H2AFY2Q9P0M6 372 aaPredicted RBP5.11□□□□□ -1.59
SSXP3-201ENST00000442971 UTP11Q9Y3A2 253 aaKnown RBP5.11□□□□□ -1.59
SSXP3-201ENST00000442971 TMEM82A0PJX8 343 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 FAM172BPA6NC97 362 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 ANKRD30BLA7E2S9 258 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 BLOC1S5-TXNDC5H3BN57 136 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 BMPR1BO00238 502 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 TOR1AO14656 332 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 MAGEB3O15480 346 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 SOX15O60248 233 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 MTRF1O75570 445 aaKnown RBP5.1□□□□□ -1.59
SSXP3-201ENST00000442971 FGGP02679 453 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 ACSM4P0C7M7 580 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 NR2F1P10589 423 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 RPL35AP18077 110 aaKnown RBP5.1□□□□□ -1.59
SSXP3-201ENST00000442971 PKNOX1P55347 436 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 EDDM3BP56851 147 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 ABCE1P61221 599 aaKnown RBP5.1□□□□□ -1.59
SSXP3-201ENST00000442971 RIPK1Q13546 671 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 EBI3Q14213 229 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 ZNF74Q16587 644 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 RFX4Q33E94 735 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 UNC50Q53HI1 259 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 LRRC34Q8IZ02 419 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 C4orf33Q8N1A6 199 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 CLRN3Q8NCR9 226 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 OR56B2PQ8NGI1 322 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 S1PR3Q99500 378 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 ALG12Q9BV10 488 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 TMEM109Q9BVC6 243 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 DPH5Q9H2P9 285 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 MAP6D1Q9H9H5 199 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 PLSCR3Q9NRY6 295 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 ZNF107Q9UII5 783 aaPredicted RBP5.1□□□□□ -1.59
SSXP3-201ENST00000442971 ANGPT4Q9Y264 503 aa5.1□□□□□ -1.59
SSXP3-201ENST00000442971 TEX13CA0A0J9YWL9 993 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 A8MT66 165 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 ZNF561-AS1K7EIQ3 104 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 ATP6V0E1O15342 81 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 SCTP09683 121 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 PRDX2P32119 198 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 PRRX1P54821 245 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 RPL18Q07020 188 aaKnown RBP5.09□□□□□ -1.59
SSXP3-201ENST00000442971 RFTN2Q52LD8 501 aaPredicted RBP5.09□□□□□ -1.59
SSXP3-201ENST00000442971 OTPQ5XKR4 325 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 OR52W1Q6IF63 320 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 CCDC137Q6PK04 289 aaKnown RBP5.09□□□□□ -1.59
SSXP3-201ENST00000442971 CLECL1Q8IZS7 167 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 Q8N6K4 173 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 CCDC197Q8NCU1 140 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 FBXO36Q8NEA4 188 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 OR2AE1Q8NHA4 323 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 ZNRF2Q8NHG8 242 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 FNDC8Q8TC99 324 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 UBLCP1Q8WVY7 318 aaPredicted RBP5.09□□□□□ -1.59
SSXP3-201ENST00000442971 SLC35B4Q969S0 331 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 TLCD1Q96CP7 247 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 FMO2Q99518 471 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 JAM3Q9BX67 310 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 HDHD2Q9H0R4 259 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 ADGRL4Q9HBW9 690 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 BATF3Q9NR55 127 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 INIPQ9NRY2 104 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 PEMTQ9UBM1 199 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 TMED3Q9Y3Q3 217 aa5.09□□□□□ -1.59
SSXP3-201ENST00000442971 A0A1W2PN81 502 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 TMEM120BA0PK00 339 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 ANKRD65E5RJM6 399 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 F5H5K5 113 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 DNALI1O14645 258 aaPredicted RBP5.08□□□□□ -1.6
SSXP3-201ENST00000442971 AIREO43918 545 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 OR2A4O95047 310 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 ASAH2BP0C7U1 165 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 CHRNA7P36544 502 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 SERPINB5P36952 375 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 RPS16P62249 146 aaKnown RBP5.08□□□□□ -1.6
SSXP3-201ENST00000442971 RPL38P63173 70 aaKnown RBP5.08□□□□□ -1.6
SSXP3-201ENST00000442971 MEF2CQ06413 473 aaPredicted RBP5.08□□□□□ -1.6
SSXP3-201ENST00000442971 MLANAQ16655 118 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 DUSP7Q16829 419 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 ANKRD55Q3KP44 614 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 KRTAP27-1Q3LI81 207 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 NANOGNBQ7Z5D8 188 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 Q8NAQ8 132 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 GJC3Q8NFK1 279 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 OR13A1Q8NGR1 328 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 RSRC1Q96IZ7 334 aaKnown RBP5.08□□□□□ -1.6
SSXP3-201ENST00000442971 MS4A14Q96JA4 679 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 DUSP26Q9BV47 211 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 ROPN1BQ9BZX4 212 aaPredicted RBP5.08□□□□□ -1.6
SSXP3-201ENST00000442971 CDIP1Q9H305 208 aa5.08□□□□□ -1.6
SSXP3-201ENST00000442971 ROPN1Q9HAT0 212 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms