RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 TMEM246Q9BRR3 403 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 HES4Q9HCC6 221 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 RASL12Q9NYN1 266 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 STEAP1Q9UHE8 339 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 CEPT1Q9Y6K0 416 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 POLQO75417 2590 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 IGHV4-61A0A0C4DH41 118 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 IFITM5A6NNB3 132 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 OR2AT4A6NND4 320 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 CEACAM18A8MTB9 384 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 VWC2LB2RUY7 222 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 H3BMQ9 156 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 AIPO00170 330 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 UBBP0CG47 229 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 ARSBP15848 533 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 RPS2P15880 293 aaKnown RBP11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 DUSP1P28562 367 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 RPS19P39019 145 aaKnown RBP11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 TMBIM6P55061 237 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 SPCS2Q15005 226 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 DGUOKQ16854 277 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 PIGYQ3MUY2 71 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 C1orf100Q5SVJ3 147 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 IDNKQ5T6J7 187 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 STUMQ69YW2 141 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 OR10K2Q6IF99 312 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 MAPK1IP1LQ8NDC0 245 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 CLDND2Q8NHS1 167 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 CCL13Q99616 98 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 DCSTAMPQ9H295 470 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 BANF2Q9H503 90 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 LIN7BQ9HAP6 207 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 TMEM165Q9HC07 324 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 HMG20AQ9NP66 347 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 PCDHB10Q9UN67 800 aa11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 ANKRD17O75179 2603 aaKnown RBP11.35□□□□□ -0.59
TM9SF4-204ENST00000442842 A0A1B0GW55 424 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 RFPL4AA6NLU0 287 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 RFPL4AL1F8VTS6 287 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 TMPRSS2O15393 492 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 ADAM20O43506 726 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 ZNF780AO75290 641 aaPredicted RBP11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 BPNT1O95861 308 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 MPIG6BO95866 241 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 KNG1P01042 644 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 IL1AP01583 271 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DUX4L2P0CJ85 424 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DUX4L3P0CJ86 424 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DUX4L4P0CJ87 422 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DUX4L5P0CJ88 424 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DUX4L6P0CJ89 424 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DUX4L7P0CJ90 424 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 PSG2P11465 335 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 FGF12P61328 243 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 IKZF1Q13422 519 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 PDCD1Q15116 288 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 TMEM155Q4W5P6 130 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DUX4L9Q6RFH8 374 aaPredicted RBP11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 LYPD2Q6UXB3 125 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DCDC5Q6ZRR9 648 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 LRRC28Q86X40 367 aaPredicted RBP11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 OSR2Q8N2R0 312 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 FAM216BQ8N7L0 139 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 OR51D1Q8NGF3 324 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 SLC25A28Q96A46 364 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 FAM3DQ96BQ1 224 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 C12orf43Q96C57 262 aaKnown RBP11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 C1orf147Q96MC9 270 aaPredicted RBP11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 BCL7BQ9BQE9 202 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 RBM38Q9H0Z9 239 aaKnown RBP11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 CST11Q9H112 138 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 IL36GQ9NZH8 169 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 GHRLQ9UBU3 117 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 RSL24D1Q9UHA3 163 aaKnown RBP11.34□□□□□ -0.59
TM9SF4-204ENST00000442842 IGKV1D-17A0A075B6S4 117 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 DPPA5A6NC42 116 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 SIRPB1O00241 398 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 SMAD7O15105 426 aaKnown RBP11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 HAND1O96004 215 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 ACAA1P09110 424 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 GTF2F2P13984 249 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 ZNF44P15621 663 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 MGMTP16455 207 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 GABRR1P24046 479 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 IL2RGP31785 369 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 BMXP51813 675 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 CAPZA1P52907 286 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 SCN1BQ07699 218 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 GPR176Q14439 515 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 FAM166AQ6J272 317 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 ASCL4Q6XD76 172 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 ASCC1Q8N9N2 400 aaKnown RBP11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 TMEM104Q8NE00 496 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 ANGPTL6Q8NI99 470 aa11.33□□□□□ -0.6
TM9SF4-204ENST00000442842 LGALS14Q8TCE9 139 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms