RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 H3BSH0 61 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 EFNA2O43921 213 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 TNFSF13O75888 250 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 CNOT4O95628 575 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 RNF224P0DH78 156 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 HOXB1P14653 301 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 KLK2P20151 261 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 PRKACBP22694 351 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 PSMA6P60900 246 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 FMODQ06828 376 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZP4Q12836 540 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 CLEC12BQ2HXU8 276 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 ODF4Q2M2E3 257 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 PCGF3Q3KNV8 242 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 PGAP1Q75T13 922 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 RNF144BQ7Z419 303 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 GABRG1Q8N1C3 465 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 C17orf78Q8N4C9 275 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC22A24Q8N4F4 322 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR51A2Q8NGJ7 313 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR6S1Q8NH40 331 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF671Q8TAW3 534 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 PIMREGQ9BSJ6 248 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 UFSP2Q9NUQ7 469 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 TMEM100Q9NV29 134 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 PLCE1Q9P212 2302 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 MPTX1A8MV57 137 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 F8VVB4 439 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 F8VWA3 439 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 RAB27BO00194 218 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 FGF16O43320 207 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 SSX5O60225 188 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 IL15RAQ13261 267 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 SHEQ5VZ18 495 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 KCNRGQ8N5I3 272 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC26A10Q8NG04 563 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR5M8Q8NGP6 311 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR1K1Q8NGR3 316 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 Q96MF0 132 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 INTS14Q96SY0 518 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 GPER1Q99527 375 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 NKX3-1Q99801 234 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 NUDT16L1Q9BRJ7 211 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 DNTTIP1Q9H147 329 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 PPA2Q9H2U2 334 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF69Q9UC07 566 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 NOP16Q9Y3C1 178 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 A0A0A6YYD4 124 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 HS3ST1O14792 307 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 IGLV3-1P01715 115 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 MAS1P04201 325 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 TNFRSF1AP19438 455 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 MZT1Q08AG7 82 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 Q6ZSR3 168 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 C14orf79Q96F83 325 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 POFUT1Q9H488 388 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 FAM206AQ9NX38 181 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 LRP12Q9Y561 859 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 A0A0A6YYH2 397 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 A6NJ64 397 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 PHYHO14832 338 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR4E1P0C645 316 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 AKAIN1P0CW23 69 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 CBR1P16152 277 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 ADCYAP1P18509 176 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 EIF2B1Q14232 305 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 MEP1BQ16820 701 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC25A53Q5H9E4 307 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC25A42Q86VD7 318 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZSCAN4Q8NAM6 433 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR4D6Q8NGJ1 314 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 NEK7Q8TDX7 302 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 ASB17Q8WXJ9 295 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC6A7Q99884 636 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 GINS4Q9BRT9 223 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 SCPEP1Q9HB40 452 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 TAS2R8Q9NYW2 309 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 ACANP16112 2415 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 B9A039 149 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 LGALS8O00214 317 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 PLAUP00749 431 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 FOSL1P15407 271 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 RAB6AP20340 208 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 SOX2P48431 317 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 CCL8P80075 99 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR8B8Q15620 311 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 GABRA6Q16445 453 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 DEFB113Q30KQ7 82 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 STEAP1BQ6NZ63 245 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 CLEC9AQ6UXN8 241 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR2Z1Q8NG97 314 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 CHIAQ9BZP6 476 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 TINAGL1Q9GZM7 467 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 SAP30LQ9HAJ7 183 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 TCF7L1Q9HCS4 588 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 CYTL1Q9NRR1 136 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 KCNK7Q9Y2U2 307 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 CELSR3Q9NYQ7 3312 aa6.36□□□□□ -1.39
CDC42BPA-208ENST00000442054 MPZL1O95297 269 aa6.35□□□□□ -1.39
CDC42BPA-208ENST00000442054 TGFAP01135 160 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms