RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TSPAN2O60636 221 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 TMEM225BP0DP42 221 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 FBXW12Q6X9E4 464 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 H1FNTQ75WM6 255 aaPredicted RBP17.74■□□□□ 0.43
SHOX2-203ENST00000441443 THADAQ6YHU6 1953 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 SHISA8B8ZZ34 492 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 E9PLN8 166 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 IGKV3-11P04433 115 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 OMGP23515 440 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 ABHD5Q8WTS1 349 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 FRZBQ92765 325 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 VN1R1Q9GZP7 353 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 LANCL2Q9NS86 450 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 NXT1Q9UKK6 140 aaKnown RBP17.74■□□□□ 0.43
SHOX2-203ENST00000441443 VDAC3Q9Y277 283 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 OPN1LWP04000 364 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 C16orf47Q6ZP98 133 aaPredicted RBP17.74■□□□□ 0.43
SHOX2-203ENST00000441443 SHISA6Q6ZSJ9 500 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 OR10AD1Q8NGE0 317 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 ADAMTS18Q8TE60 1221 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 OIT3Q8WWZ8 545 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 BCO1Q9HAY6 547 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 TMED3Q9Y3Q3 217 aa17.74■□□□□ 0.43
SHOX2-203ENST00000441443 TERTO14746 1132 aaKnown RBP17.73■□□□□ 0.43
SHOX2-203ENST00000441443 SRP19P09132 144 aaKnown RBP17.73■□□□□ 0.43
SHOX2-203ENST00000441443 OR5H8P0DN80 308 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 CD38P28907 300 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 OPRM1P35372 400 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 ARL4DP49703 201 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 NOVA1P51513 510 aaKnown RBP17.73■□□□□ 0.43
SHOX2-203ENST00000441443 GPR157Q5UAW9 335 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 SPSB3Q6PJ21 355 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 OR5L1Q8NGL2 311 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 OR2AJ1Q8NGZ0 328 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 RNASE11Q8TAA1 199 aaKnown RBP17.73■□□□□ 0.43
SHOX2-203ENST00000441443 FOXI3A8MTJ6 420 aaPredicted RBP17.73■□□□□ 0.43
SHOX2-203ENST00000441443 TMEM187Q14656 261 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 C1orf189Q5VU69 101 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 CARD17Q5XLA6 110 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 RTN4IP1Q8WWV3 396 aaPredicted RBP17.73■□□□□ 0.43
SHOX2-203ENST00000441443 CRLF2Q9HC73 371 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 PLEKHJ1Q9NW61 149 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 MTCH2Q9Y6C9 303 aa17.73■□□□□ 0.43
SHOX2-203ENST00000441443 IGHV1OR15-9A0A0B4J2B8 117 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 ZNF724A8MTY0 619 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 TMEM150CB9EJG8 249 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 ABCA11PQ4W5N1 156 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 P4HA3Q7Z4N8 544 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 CPEB2Q7Z5Q1 589 aaKnown RBP17.72■□□□□ 0.43
SHOX2-203ENST00000441443 FAM24AA6NFZ4 105 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 RPL36A-HNRNPH2H7BZ11 118 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 ATP6V0CP27449 155 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 EFNA3P52797 238 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 RSPO4Q2I0M5 234 aaPredicted RBP17.72■□□□□ 0.43
SHOX2-203ENST00000441443 CRIP3Q6Q6R5 217 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 STT3BQ8TCJ2 826 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 AK3Q9UIJ7 227 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 MED12Q93074 2177 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 LRP4O75096 1905 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 A0A1B0GW64 132 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 ZNF850A8MQ14 1090 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 SERPINE3A8MV23 424 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 MSTNO14793 375 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 FAM189A2Q15884 450 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 ZNF283Q8N7M2 679 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 PACRGQ96M98 296 aaPredicted RBP17.72■□□□□ 0.43
SHOX2-203ENST00000441443 ZNF581Q9P0T4 197 aa17.72■□□□□ 0.43
SHOX2-203ENST00000441443 A0A1W2PQD3 144 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 ST8SIA3O43173 380 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 PTBP3O95758 552 aaKnown RBP17.71■□□□□ 0.43
SHOX2-203ENST00000441443 EWSR1Q01844 656 aaKnown RBP eCLIP17.71■□□□□ 0.43
SHOX2-203ENST00000441443 USF2Q15853 346 aaPredicted RBP17.71■□□□□ 0.43
SHOX2-203ENST00000441443 LURAP1Q96LR2 239 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 NAA60Q9H7X0 242 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 PHOX2AO14813 284 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 MDKP21741 143 aaPredicted RBP17.71■□□□□ 0.43
SHOX2-203ENST00000441443 GALNSP34059 522 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 CSNK1A1P48729 337 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 OR1D5P58170 312 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 PIGTQ969N2 578 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 UNKLQ9H9P5 680 aaKnown RBP17.71■□□□□ 0.43
SHOX2-203ENST00000441443 PISDQ9UG56 409 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 ANXA10Q9UJ72 324 aa17.71■□□□□ 0.43
SHOX2-203ENST00000441443 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 DBHP09172 617 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 FCGR2AP12318 317 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 AKR1C8PQ5T2L2 129 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 SUMF1Q8NBK3 374 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 TVP23CQ96ET8 276 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 NIPSNAP3BQ9BS92 247 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 CHST11Q9NPF2 352 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 WSB1Q9Y6I7 421 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 COL6A3P12111 3177 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 A0A087WWC5 75 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 SNRPCP09234 159 aaKnown RBP17.7■□□□□ 0.42
SHOX2-203ENST00000441443 ZNF728P0DKX0 622 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 ZNF43P17038 809 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 IL2RGP31785 369 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 ZNF385CQ66K41 422 aaPredicted RBP17.7■□□□□ 0.42
SHOX2-203ENST00000441443 OR11L1Q8NGX0 322 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms