RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 MS4A15Q8N5U1 240 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 SARAFQ96BY9 339 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 C20orf173Q96LM9 149 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 UBQLN4Q9NRR5 601 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 C1RLQ9NZP8 487 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 RALYQ9UKM9 306 aaKnown RBP9.1□□□□□ -0.95
SYNE2-206ENST00000441438 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 A8MVM7 634 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 F5H5K5 113 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 PRAMEF10O60809 474 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 UPK1BO75841 260 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 TRAPPC6AO75865 159 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 SMIM10L2AP0DMW4 78 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 SMIM10L2BP0DMW5 78 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 GP9P14770 177 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 PYCR1P32322 319 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 RFX2P48378 723 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 SNRPD2P62316 118 aaKnown RBP9.09□□□□□ -0.95
SYNE2-206ENST00000441438 ZNF343Q6P1L6 599 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 PRSS48Q7RTY5 328 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 OR10R2Q8NGX6 335 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 IL22RA2Q969J5 263 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 PYCR2Q96C36 320 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 NDFIP1Q9BT67 221 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
SYNE2-206ENST00000441438 KIF26AQ9ULI4 1882 aaPredicted RBP9.09□□□□□ -0.95
SYNE2-206ENST00000441438 KCNS2Q9ULS6 477 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 X6R8D5 127 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 TCRBV5S2A0A599 114 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 NME4O00746 187 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 MPDU1O75352 247 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 BTG2P78543 158 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 OR8B8Q15620 311 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 TP53I3Q53FA7 332 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 MESTQ5EB52 335 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 KDM4DQ6B0I6 523 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 OR13C8Q8NGS7 320 aa9.09□□□□□ -0.95
SYNE2-206ENST00000441438 MYBPHLA2RUH7 354 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 PDCD5O14737 125 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 FGF10O15520 208 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 EIF4E2O60573 245 aaKnown RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 HPXP02790 462 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 SPNP16150 400 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 XGP55808 180 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 TAS2R30P59541 319 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 ADAMTSL5Q6ZMM2 481 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 CBLL1Q75N03 491 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 IFNEQ86WN2 208 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 EID2Q8N6I1 236 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 B3GALNT2Q8NCR0 500 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 BPIFB6Q8NFQ5 453 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 OR4X1Q8NH49 305 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 DYRK2Q92630 601 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 ZC3HAV1LQ96H79 300 aaKnown RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 FYTTD1Q96QD9 318 aaKnown RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 OR2M4Q96R27 311 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 AURKAIP1Q9NWT8 199 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 JKAMPQ9P055 326 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 COMMD3Q9UBI1 195 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 DCDC2BA2VCK2 349 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 GHRHP01286 108 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 RPL35AP18077 110 aaKnown RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 AMTP48728 403 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 RAB8AP61006 207 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 RUNX1Q01196 453 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 KLRB1Q12918 225 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 MELKQ14680 651 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 SNAI3Q3KNW1 292 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 OR9I1Q8NGQ6 314 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 CDCP1Q9H5V8 836 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 TMEM74BQ9NUR3 256 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 OR4C46A6NHA9 309 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 CD2P06729 351 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 PLP2Q04941 152 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 HERPUD1Q15011 391 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 HIST2H2AA3Q6FI13 130 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 PRSS54Q6PEW0 395 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 TOMM20LQ6UXN7 152 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 LARP4Q71RC2 724 aaKnown RBP eCLIP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 RPS27LQ71UM5 84 aaKnown RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 DTX2Q86UW9 622 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 NPWQ8N729 165 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 OR4S1Q8NGB4 309 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 MRPL57Q9BQC6 102 aaKnown RBP9.08□□□□□ -0.96
SYNE2-206ENST00000441438 FOXQ1Q9C009 403 aa9.08□□□□□ -0.96
SYNE2-206ENST00000441438 PRKNO60260 465 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-206ENST00000441438 CLIC3O95833 236 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 NUDT3O95989 172 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 GPX3P22352 226 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 AADACP22760 399 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 RHOGP84095 191 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 DEFA5Q01523 94 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 ZNF439Q8NDP4 499 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 RHOXF1Q8NHV9 184 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 ASB13Q8WXK3 278 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 HYLS1Q96M11 299 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 Q96MF0 132 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 CCDC115Q96NT0 180 aa9.07□□□□□ -0.96
SYNE2-206ENST00000441438 OXGR1Q96P68 337 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms