RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PPP3CBP16298 524 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 ANOS1P23352 680 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 ZBTB25P24278 435 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 BLVRBP30043 206 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 NTF4P34130 210 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 RFC3P40938 356 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 HTR2BP41595 481 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 OR3A3P47888 321 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 OR3A2P47893 321 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 SEC61A1P61619 476 aaKnown RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 SNRPD2P62316 118 aaKnown RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 SRYQ05066 204 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 ZNF345Q14585 488 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 NKPD1Q17RQ9 610 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 MICBQ29980 383 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 PLCXD3Q63HM9 321 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 CRIP3Q6Q6R5 217 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 TEX261Q6UWH6 196 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 MRPL21Q7Z2W9 205 aaKnown RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 NUFIP2Q7Z417 695 aaKnown RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 PEG10Q86TG7 708 aaKnown RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 LINC00596Q86U02 117 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 TUSC5Q8IXB3 177 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 TMEM185AQ8NFB2 350 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 OR4S1Q8NGB4 309 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 OR11H4Q8NGC9 324 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 OR8H1Q8NGG4 311 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 OR52B4Q8NGK2 314 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 OR5D18Q8NGL1 313 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 OR2AE1Q8NHA4 323 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 NPRL2Q8WTW4 380 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 EMG1Q92979 244 aaKnown RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 MS4A3Q96HJ5 214 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 DHRS9Q9BPW9 319 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 CHIAQ9BZP6 476 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 CALHM2Q9HA72 323 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 ELL3Q9HB65 397 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 PLA2G3Q9NZ20 509 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 COMMD9Q9P000 198 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 UBQLN2Q9UHD9 624 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 VSIG4Q9Y279 399 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 MAB21L2Q9Y586 359 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 U3KQ87 197 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 CSPG4Q6UVK1 2322 aa7.9□□□□□ -1.15
HDAC6-209ENST00000440653 A0A1B0GW55 424 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 C5orf63A6NC05 138 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 TSC22D2O75157 780 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 CST4P01036 141 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 DUX4L2P0CJ85 424 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 DUX4L3P0CJ86 424 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 DUX4L4P0CJ87 422 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 DUX4L5P0CJ88 424 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 DUX4L6P0CJ89 424 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 DUX4L7P0CJ90 424 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 EDN3P14138 238 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 NFYAP23511 347 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 APLNRP35414 380 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 SNU13P55769 128 aaKnown RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 H2BFSP57053 126 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 ARPC4P59998 168 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 IL13RA1P78552 427 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 CYCSP99999 105 aaKnown RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 TGFBR3Q03167 851 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 GRK1Q15835 563 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 PLEKHN1Q494U1 663 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 CHRFAM7AQ494W8 412 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 TMEM128Q5BJH2 165 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 NHLRC3Q5JS37 347 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 FBXW9Q5XUX1 488 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 OR52W1Q6IF63 320 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 LHFPL1Q86WI0 220 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 ZDHHC23Q8IYP9 409 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 GVQW1Q8N7I0 195 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 Q8NA96 180 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 OR5AP2Q8NGF4 316 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 OR5L1Q8NGL2 311 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 OR1K1Q8NGR3 316 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 TERB2Q8NHR7 220 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 SPATA3Q8NHX4 192 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 COQ8AQ8NI60 647 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 ZNF775Q96BV0 537 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 WDYHV1Q96HA8 205 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 PPA2Q9H2U2 334 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 ZNF552Q9H707 407 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 RHOFQ9HBH0 211 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 ZNF701Q9NV72 531 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 PLEKHJ1Q9NW61 149 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 CLCF1Q9UBD9 225 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 DUX4Q9UBX2 424 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 SLC23A1Q9UHI7 598 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 C14orf166Q9Y224 244 aaKnown RBP7.89□□□□□ -1.15
HDAC6-209ENST00000440653 LIPGQ9Y5X9 500 aa7.89□□□□□ -1.15
HDAC6-209ENST00000440653 A0A0D9SG52 128 aa7.88□□□□□ -1.15
HDAC6-209ENST00000440653 A0A1W2PP11 408 aa7.88□□□□□ -1.15
HDAC6-209ENST00000440653 FAM230AA0A1W2PPH8 454 aa7.88□□□□□ -1.15
HDAC6-209ENST00000440653 C9orf170A2RU37 121 aa7.88□□□□□ -1.15
HDAC6-209ENST00000440653 OR5B21A6NL26 309 aa7.88□□□□□ -1.15
HDAC6-209ENST00000440653 FIGNL2A6NMB9 653 aa7.88□□□□□ -1.15
HDAC6-209ENST00000440653 OR2AT4A6NND4 320 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms