RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 HEXA-AS1Q9H8Q6 139 aa16.24■□□□□ 0.19
SHROOM1-204ENST00000440118 S100A14Q9HCY8 104 aa16.24■□□□□ 0.19
SHROOM1-204ENST00000440118 PRKACBP22694 351 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 MTCP1P56278 107 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 LGALS4P56470 323 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 ISL1P61371 349 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 ZNF91Q05481 1191 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 TAF9Q16594 264 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 PRR31Q5SQ13 230 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 ZBTB49Q6ZSB9 765 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 EGFL6Q8IUX8 553 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 MKXQ8IYA7 352 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 Q8IYB0 196 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 ZNF676Q8N7Q3 588 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 STMN2Q93045 179 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 ALG8Q9BVK2 526 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 ZNF696Q9H7X3 374 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 AASSQ9UDR5 926 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 HHLA2Q9UM44 414 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 DSCAML1Q8TD84 2053 aa16.23■□□□□ 0.19
SHROOM1-204ENST00000440118 IGKV1-27A0A075B6S5 117 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 BAG2O95816 211 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 CHRM2P08172 466 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 CCL3L1P16619 93 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 AZGP1P25311 298 aaKnown RBP16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 ERVFRD-1P60508 538 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 EDDM3AQ14507 147 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 MIDNQ504T8 468 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 TMEM200BQ69YZ2 307 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 PQLC1Q8N2U9 271 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 FGGYQ96C11 551 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 LGALS12Q96DT0 336 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 ADAT3Q96EY9 351 aaPredicted RBP16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 NEK6Q9HC98 313 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 MTCH1Q9NZJ7 389 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 FRRS1LQ9P0K9 344 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 RNF114Q9Y508 228 aa16.22■□□□□ 0.19
SHROOM1-204ENST00000440118 H3BUX3 64 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 K7N7A8 449 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 FADS2O95864 444 aaKnown RBP16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 DBTP11182 482 aaKnown RBP16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 ATF1P18846 271 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 SNU13P55769 128 aaKnown RBP16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 ERVK11-1P61568 191 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 RIPK1Q13546 671 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 ZNF273Q14593 569 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 ZNF782Q6ZMW2 699 aaPredicted RBP16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 LHFPL2Q6ZUX7 228 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 ENTHD1Q8IYW4 607 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 ZSCAN4Q8NAM6 433 aaPredicted RBP16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 DNAAF1Q8NEP3 725 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 SPSB1Q96BD6 273 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 OPALINQ96PE5 141 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 GLS2Q9UI32 602 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 PKD1L1Q8TDX9 2849 aa16.21■□□□□ 0.19
SHROOM1-204ENST00000440118 HAND1O96004 215 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 ISG15P05161 165 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 GABRR1P24046 479 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 NANOS3P60323 173 aaKnown RBP16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 FDX2Q6P4F2 183 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 UTS2BQ765I0 119 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 LHFPL3Q86UP9 236 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 OR8H2Q8N162 312 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 BEND2Q8NDZ0 799 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 ZNF555Q8NEP9 628 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 PELI1Q96FA3 418 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 AMBNQ9NP70 447 aa16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 EXOGQ9Y2C4 368 aaKnown RBP16.2■□□□□ 0.18
SHROOM1-204ENST00000440118 LOC100130705A0A1B0GUX0 176 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 MEX3AA1L020 520 aaKnown RBP16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 F8VVB4 439 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 F8VWA3 439 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 J3QRE1 110 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 PRKACAP17612 351 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 BCL3P20749 454 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 TGFBR2P37173 567 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 CCR9P51686 369 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 ALKBH1Q13686 389 aaKnown RBP16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 GALEQ14376 348 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 LRRC75BQ2VPJ9 315 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 HCP5Q6MZN7 132 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 FAM58AQ8N1B3 248 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 OR13C9Q8NGT0 318 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 TSEN15Q8WW01 171 aaKnown RBP16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 RFT1Q96AA3 541 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 SSX3Q99909 188 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 COMMD4Q9H0A8 199 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 PPA2Q9H2U2 334 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 INPP5EQ9NRR6 644 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 RBFOX1Q9NWB1 397 aaKnown RBP16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 RPL36Q9Y3U8 105 aaKnown RBP16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 PCDHGB5Q9Y5G0 923 aa16.19■□□□□ 0.18
SHROOM1-204ENST00000440118 TRBV2A0A0J9YWF9 115 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 ANKRD65E5RJM6 399 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 HCKP08631 526 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 PEX2P28328 305 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 BMXP51813 675 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 SRSF4Q08170 494 aaKnown RBP16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 RAB40BQ12829 278 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 GRK1Q15835 563 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms