RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 A0A087WZY1 265 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 LOC102723996A0A087X1L8 192 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 DEDDO75618 318 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 FGF5P12034 268 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 CRYGSP22914 178 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 PPT1P50897 306 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 HIST1H3AP68431 136 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 MRPS34P82930 218 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF616Q08AN1 781 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 HIST2H3PS2Q5TEC6 136 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 HIST2H3AQ71DI3 136 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 AAED1Q7RTV5 226 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 AGBL5Q8NDL9 886 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 SECTM1Q8WVN6 248 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 HLA-CQ95604 372 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 SMIM8Q96KF7 97 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 DNAJB11Q9UBS4 358 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 AMDHD2Q9Y303 409 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 RFNGQ9Y644 331 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 CCDC163A0A0D9SF12 145 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 CBR3O75828 277 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 OR7C1O76099 320 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 SNAPINO95295 136 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 CTSDP07339 412 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 NPBWR2P48146 333 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 GPR137CQ8N3F9 429 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 PRELID3BQ9Y3B1 194 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 KCNJ3P48549 501 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 FLI1Q01543 452 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 SRYQ05066 204 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 SURF2Q15527 256 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 TGIF1Q15583 401 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 LPAL2Q16609 132 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 FAM76BQ5HYJ3 339 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 DHRS11Q6UWP2 260 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 CALHM1Q8IU99 346 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 SUMF1Q8NBK3 374 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 CLDN23Q96B33 292 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 C20orf24Q9BUV8 137 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 SEC11CQ9BY50 192 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF700Q9H0M5 742 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 WDR54Q9H977 334 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 NECAP2Q9NVZ3 263 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 CARHSP1Q9Y2V2 147 aaKnown RBP11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 CST4P01036 141 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 CRYBA1P05813 215 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF133P52736 654 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 NHLH2Q02577 135 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 IL11RAQ14626 422 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 EXT1Q16394 746 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 SWI5Q1ZZU3 235 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 IL34Q6ZMJ4 242 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 Q6ZPA2 131 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 LINC00518Q8N0U6 118 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 OR10Z1Q8NGY1 313 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 RXFP4Q8TDU9 374 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 NAT6Q93015 286 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 SH3BGRL3Q9H299 93 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF442Q9H7R0 627 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 SLC2A9Q9NRM0 540 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 TMEM38BQ9NVV0 291 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 PILRBQ9UKJ0 227 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 KCNIP3Q9Y2W7 256 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 GPR179Q6PRD1 2367 aa11.75□□□□□ -0.53
HERPUD1-204ENST00000439977 A0A096LPE4 126 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 A0A1W2PPZ6 126 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 PHF1O43189 567 aaPredicted RBP11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 NXPH3O95157 252 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 ONECUT2O95948 504 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 SPP1P10451 314 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 CHATP28329 748 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 RAB35Q15286 201 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 IGSF11Q5DX21 431 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 SKA3Q8IX90 412 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 HSD17B11Q8NBQ5 300 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 OR2Y1Q8NGV0 311 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 OR10D3Q8NH80 312 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 WFDC1Q9HC57 220 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 NDRG3Q9UGV2 375 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 APOC1P02654 83 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 P04436 131 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 MLF1P58340 268 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 RAC3P60763 192 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 TMEM268Q5VZI3 342 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 EIF5AL1Q6IS14 154 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 FOXL2NBQ6ZUU3 175 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 IQCF2Q8IXL9 164 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 OSR2Q8N2R0 312 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 SPSB1Q96BD6 273 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 FOXB1Q99853 325 aa11.74□□□□□ -0.53
HERPUD1-204ENST00000439977 DAOP14920 347 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 DUSP1P28562 367 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 SULT1A2P50226 295 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 CLDN15P56746 228 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 B3GALT5-AS1P59052 145 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 FAM3AP98173 230 aa11.73□□□□□ -0.53
HERPUD1-204ENST00000439977 Q0VFX4 171 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms