RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MRPS34P82930 218 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 KRTAP27-1Q3LI81 207 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 C4orf46Q504U0 113 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 C11orf87Q6NUJ2 197 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 LRFN4Q6PJG9 635 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CLEC18BQ6UXF7 455 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ACOT7LQ6ZUV0 252 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF627Q7L945 461 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 BIVMQ86UB2 503 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PDZD9Q8IXQ8 264 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PAQR4Q8N4S7 273 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 DTX3Q8N9I9 347 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CLEC18CQ8NCF0 446 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 BEST4Q8NFU0 473 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 OR52H1Q8NGJ2 320 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 OR1J2Q8NGS2 313 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 OR13C8Q8NGS7 320 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 WNT2BQ93097 391 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 FBXW5Q969U6 566 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 SPSB1Q96BD6 273 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MRPS24Q96EL2 167 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MS4A3Q96HJ5 214 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 HS3ST6Q96QI5 342 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 VRK1Q99986 396 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CHST6Q9GZX3 395 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CNTD2Q9H8S5 307 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 IFT46Q9NQC8 304 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 DNAJB11Q9UBS4 358 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 HSF4Q9ULV5 492 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 TNFSF18Q9UNG2 199 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 RAB19A4D1S5 217 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MBD3L4A6NDZ8 208 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MBD3L3A6NE82 208 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MBD3L5A6NJ08 208 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TEX46H3BTG2 121 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 GOSR2O14653 212 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 SMAD7O15105 426 aaKnown RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 VSIG8P0DPA2 414 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF35P13682 527 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CEACAM8P31997 349 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TIMP3P35625 211 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 RBMXP38159 391 aaKnown RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF84P51523 738 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TAGLNQ01995 201 aaKnown RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 DHRS2Q13268 280 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 SRSF7Q16629 238 aaKnown RBP eCLIP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 HIKESHIQ53FT3 197 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TMEM128Q5BJH2 165 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 LY6G6FQ5SQ64 297 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 PDSS1Q5T2R2 415 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 RIPPLY2Q5TAB7 128 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 DRAM2Q6UX65 266 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ASCL4Q6XD76 172 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TRAPPC6BQ86SZ2 158 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 JAGN1Q8N5M9 183 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 OR4D6Q8NGJ1 314 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 OR10S1Q8NGN2 331 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 OR14K1Q8NGZ2 314 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MBD3L2Q8NHZ7 208 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF837Q96EG3 531 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 PERPQ96FX8 193 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 REG4Q9BYZ8 158 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MFFQ9GZY8 342 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 RNF122Q9H9V4 155 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ZFP57Q9NU63 452 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 DECR2Q9NUI1 292 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 IL36GQ9NZH8 169 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF629Q9UEG4 869 aaPredicted RBP4.11□□□□□ -1.75
EDEM3-203ENST00000439962 NDRG3Q9UGV2 375 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 GTF2A1LQ9UNN4 478 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 LAMP3Q9UQV4 416 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 KANTRA0A1W2PQU2 76 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 C9orf170A2RU37 121 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A10PA6NDY2 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A18PA6NE21 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A16PA6NEW6 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A20PA6NIJ5 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A8PA6NJQ4 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A7PA6NKC0 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A22PA8MWA6 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A12PA8MX19 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A5PA8MXJ8 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A23PA8MXZ1 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 F8VVB4 439 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 F8VWA3 439 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 C16orf97H3BN30 126 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 P2RY10O00398 339 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 MFNGO00587 321 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TAAR5O14804 337 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CDC14BO60729 498 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 TSC22D2O75157 780 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 DHRS3O75911 302 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 LY6HO94772 140 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 KDM4BO94953 1096 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 IFNA6P05013 189 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 NMBP08949 121 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 CST2P09228 141 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A15PP0C7V4 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A13PP0C7W8 464 aa4.11□□□□□ -1.75
EDEM3-203ENST00000439962 FAM90A14PP0C7W9 464 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms