RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 TMIGD3P0DMS9 266 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 ASCL1P50553 236 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 HLXQ14774 488 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF718Q3SXZ3 478 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SLC22A25Q6T423 547 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 GFRALQ6UXV0 394 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 TFAP2EQ6VUC0 442 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 CBLN2Q8IUK8 224 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 WBP1Q96G27 269 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 WDR87Q6ZQQ6 2873 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 LRRK1Q38SD2 2015 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SMCO3A2RU48 225 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SERPINE3A8MV23 424 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 C9orf172C9J069 976 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 B3GALNT1O75752 331 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 TMPRSS3P57727 454 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SSBP1Q04837 148 aaKnown RBP10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 FAM27BQ5VT28 67 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SLC25A47Q6Q0C1 308 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SLC16A13Q7RTY0 426 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SLC30A7Q8NEW0 376 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 LHFPL5Q8TAF8 219 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SLC39A7Q92504 469 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SSX3Q99909 188 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SCNM1Q9BWG6 230 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SLC7A10Q9NS82 523 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 CLDN16Q9Y5I7 305 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 EFSO43281 561 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 OR4E1P0C645 316 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 OR5H8P0DN80 308 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 HIST1H1DP16402 221 aaKnown RBP10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 TBPP20226 339 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 TMEM229BQ8NBD8 167 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 POC1BQ8TC44 478 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 DMRTA2Q96SC8 542 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 NPAS1Q99742 590 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 HINT2Q9BX68 163 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 C1orf123Q9NWV4 160 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 KIR2DS1A0A191URI9 304 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 KIR2DS4P43632 304 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 EFNB2P52799 333 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 EDDM3AQ14507 147 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 KIR2DS1Q14954 304 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF239Q16600 458 aaKnown RBP10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 OR2W3Q7Z3T1 314 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 C20orf196Q8IYI0 205 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 SUMF2Q8NBJ7 301 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 OR1S1Q8NH92 325 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 SDSLQ96GA7 329 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 LHFPL6Q9Y693 200 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 DOCK7Q96N67 2140 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 ABCA1O95477 2261 aa10.15□□□□□ -0.78
TRAPPC9-202ENST00000438773 M0R1B8 84 aa10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 SPINK2P20155 84 aa10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 NKX6-1P78426 367 aaPredicted RBP10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 FBXW12Q6X9E4 464 aa10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 LRRC75AQ8NAA5 344 aa10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 REG4Q9BYZ8 158 aa10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 OR2H1Q9GZK4 316 aa10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 PIPOXQ9P0Z9 390 aa10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 GNG12Q9UBI6 72 aa10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 PCDHGA9Q9Y5G4 932 aaKnown RBP10.15□□□□□ -0.79
TRAPPC9-202ENST00000438773 MPDZO75970 2070 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 TRBV5-5A0A0J9YX44 114 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 TMEM200CA6NKL6 621 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 PHF1O43189 567 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 NDUFB6O95139 128 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 CD59P13987 128 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 SELEP16581 610 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 NHLRC3Q5JS37 347 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 TEX30Q5JUR7 227 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 TUBG2Q9NRH3 451 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 RYDENQ9NUL5 291 aaKnown RBP10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 NPIPB13A6NJU9 1138 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 NPIPB4C9JG80 1138 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 NPIPB7O75200 414 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 GNG3P63215 75 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 PLA2G7Q13093 441 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 IGSF11Q5DX21 431 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 CLEC9AQ6UXN8 241 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 GVQW1Q8N7I0 195 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 RNF141Q8WVD5 230 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 FBXO17Q96EF6 278 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 SIGLEC12Q96PQ1 595 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 PBDC1Q9BVG4 233 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 CNTNAP3Q9BZ76 1288 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF407Q9C0G0 2248 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 DAOP14920 347 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 BMP5P22003 454 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 CA6P23280 308 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 EDDM3BP56851 147 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 DEFA6Q01524 100 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 C2orf68Q2NKX9 166 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 LPCAT3Q6P1A2 487 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 C6orf201Q7Z4U5 140 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 DPPA2Q7Z7J5 298 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 BPIFCQ8NFQ6 507 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 TERB2Q8NHR7 220 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 SRXN1Q9BYN0 137 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms