RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 NEDD8Q15843 81 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 WDR25Q64LD2 544 aaPredicted RBP13.44□□□□□ -0.26
SNRPB-202ENST00000438552 CEACAM19Q7Z692 300 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 EMG1Q92979 244 aaKnown RBP13.44□□□□□ -0.26
SNRPB-202ENST00000438552 CPNE2Q96FN4 548 aaPredicted RBP13.44□□□□□ -0.26
SNRPB-202ENST00000438552 FAM192AQ9GZU8 254 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 PPIL3Q9H2H8 161 aaKnown RBP13.44□□□□□ -0.26
SNRPB-202ENST00000438552 NDUFB11Q9NX14 153 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 KAAG1Q9UBP8 84 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 CLN8Q9UBY8 286 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 ZNF222Q9UK12 451 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 FOXJ3Q9UPW0 622 aa13.44□□□□□ -0.26
SNRPB-202ENST00000438552 SONP18583 2426 aaKnown RBP13.43□□□□□ -0.26
SNRPB-202ENST00000438552 TRAV20A0A0B4J274 112 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 RFPL4AA6NLU0 287 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 RFPL4AL1F8VTS6 287 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 DVL1O14640 695 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 MAS1P04201 325 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 ALDOBP05062 364 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 TMEM225BP0DP42 221 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 ZNF93P35789 620 aaPredicted RBP13.43□□□□□ -0.26
SNRPB-202ENST00000438552 SNU13P55769 128 aaKnown RBP13.43□□□□□ -0.26
SNRPB-202ENST00000438552 FABP5Q01469 135 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 TRAM1Q15629 374 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 TMEM91Q6ZNR0 172 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 ZNF788Q6ZQV5 615 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 SLC36A1Q7Z2H8 476 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 TNFAIP8L1Q8WVP5 186 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 ST8SIA4Q92187 359 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 ZNF696Q9H7X3 374 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 OR14J1Q9UGF5 321 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 OR5V1Q9UGF6 321 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 METRNQ9UJH8 293 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 HIVEP2P31629 2446 aa13.43□□□□□ -0.26
SNRPB-202ENST00000438552 KDM4BO94953 1096 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 KNG1P01042 644 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 SFTPBP07988 381 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 UCHL1P09936 223 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 PRKACAP17612 351 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 CPT2P23786 658 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 PSMA1P25786 263 aaKnown RBP13.42□□□□□ -0.26
SNRPB-202ENST00000438552 IL13RA1P78552 427 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 HSD17B12Q53GQ0 312 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 ATPAF1Q5TC12 328 aaPredicted RBP13.42□□□□□ -0.26
SNRPB-202ENST00000438552 IL17RELQ6ZVW7 336 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 C1QL2Q7Z5L3 287 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 Q8IYB0 196 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 SAXO1Q8IYX7 474 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 JAGN1Q8N5M9 183 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 CD177Q8N6Q3 437 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 TSPAN14Q8NG11 270 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 DNTTIP1Q9H147 329 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 TCF7L1Q9HCS4 588 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 MMP26Q9NRE1 261 aa13.42□□□□□ -0.26
SNRPB-202ENST00000438552 FN1P02751 2386 aaKnown RBP13.42□□□□□ -0.26
SNRPB-202ENST00000438552 C22orf46C9J442 243 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 CCRL2O00421 344 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 SIGLEC5O15389 551 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 ADRA2CP18825 462 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 NPY4RP50391 375 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 DGUOKQ16854 277 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 CR1LQ2VPA4 569 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 DCAF12L2Q5VW00 463 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 FAM58AQ8N1B3 248 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 PNLDC1Q8NA58 520 aaKnown RBP13.41□□□□□ -0.26
SNRPB-202ENST00000438552 ZSCAN4Q8NAM6 433 aaPredicted RBP13.41□□□□□ -0.26
SNRPB-202ENST00000438552 ZNRF1Q8ND25 227 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 TMEM185AQ8NFB2 350 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 OR10K1Q8NGX5 313 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 ELL3Q9HB65 397 aaPredicted RBP13.41□□□□□ -0.26
SNRPB-202ENST00000438552 POLR3KQ9Y2Y1 108 aaPredicted RBP13.41□□□□□ -0.26
SNRPB-202ENST00000438552 WNK2Q9Y3S1 2297 aa13.41□□□□□ -0.26
SNRPB-202ENST00000438552 A0A087WXM4 84 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 IGHV2-70DA0A0C4DH43 119 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 A0A0G2JMP0 313 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 A0A0X1KG70 313 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 NDUFB3O43676 98 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 DUSP1P28562 367 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 PRDX2P32119 198 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 PTGFRP43088 359 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 PAX2Q02962 417 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 LRRTM1Q86UE6 522 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 NKAIN3Q8N8D7 197 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 PXT1Q8NFP0 134 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 OR4M2Q8NGB6 313 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 MUL1Q969V5 352 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 SDSLQ96GA7 329 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 MED30Q96HR3 178 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 HMG20AQ9NP66 347 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 SLC25A10Q9UBX3 287 aaPredicted RBP13.4□□□□□ -0.26
SNRPB-202ENST00000438552 MAB21L2Q9Y586 359 aa13.4□□□□□ -0.26
SNRPB-202ENST00000438552 LOC105371242A0A075B767 164 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 ARL6IP5O75915 188 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 CDRT1O95170 752 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 CALRP27797 417 aaKnown RBP13.39□□□□□ -0.27
SNRPB-202ENST00000438552 CAPZA1P52907 286 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 RSU1Q15404 277 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 LRRC10Q5BKY1 277 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 FAM120AOSQ5T036 256 aa13.39□□□□□ -0.27
SNRPB-202ENST00000438552 SYT6Q5T7P8 510 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms