RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 HS3ST5Q8IZT8 346 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 CD177Q8N6Q3 437 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 PPP1R35Q8TAP8 253 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 NDNFQ8TB73 568 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 CANT1Q8WVQ1 401 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 C17orf50Q8WW18 174 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 SGCDQ92629 289 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 R3HDM4Q96D70 268 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 OR8B4Q96RC9 309 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 NRIP2Q9BQI9 281 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 ADI1Q9BV57 179 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 CDCA4Q9BXL8 241 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 PRSS22Q9GZN4 317 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 MEGF9Q9H1U4 602 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 GPR173Q9NS66 373 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 ENOPH1Q9UHY7 261 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 SLC22A13Q9Y226 551 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 FAM230AA0A1W2PPH8 454 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 PQLC2LA1A4F0 135 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 DHRS7CA6NNS2 312 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 GYG2O15488 501 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 SYNGR1O43759 233 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 CHST1O43916 411 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 FKBP6O75344 327 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 SERPINA3P01011 423 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 RBP4P02753 201 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 TK1P04183 234 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 CHRM2P08172 466 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 PAX6P26367 422 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 ATP6V1E1P36543 226 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 VDAC2P45880 294 aaPredicted RBP6.29□□□□□ -1.4
VPS50-204ENST00000438395 CRISP1P54107 249 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 CXCR4P61073 352 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 PRKDCP78527 4128 aaKnown RBP6.29□□□□□ -1.4
VPS50-204ENST00000438395 TAGLNQ01995 201 aaKnown RBP6.29□□□□□ -1.4
VPS50-204ENST00000438395 SLC34A1Q06495 639 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 MFGE8Q08431 387 aaPredicted RBP6.29□□□□□ -1.4
VPS50-204ENST00000438395 EDDM3AQ14507 147 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 ZNF273Q14593 569 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 SSX2Q16385 188 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 SLX4IPQ5VYV7 408 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 HCP5Q6MZN7 132 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 FAM220AQ7Z4H9 259 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 TRAPPC6BQ86SZ2 158 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 TMEM219Q86XT9 240 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 CALHM1Q8IU99 346 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 GID4Q8IVV7 300 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 SLC35F2Q8IXU6 374 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 BATF2Q8N1L9 274 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 YIPF7Q8N8F6 280 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 TRMT10AQ8TBZ6 339 aaKnown RBP6.29□□□□□ -1.4
VPS50-204ENST00000438395 AKR1E2Q96JD6 320 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 CEP19Q96LK0 163 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 OR5M11Q96RB7 305 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 APOL4Q9BPW4 351 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 KRT84Q9NSB2 600 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 GLS2Q9UI32 602 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 OR52A1Q9UKL2 312 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 TCF19Q9Y242 345 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 TBL2Q9Y4P3 447 aaKnown RBP6.29□□□□□ -1.4
VPS50-204ENST00000438395 PCDHGB5Q9Y5G0 923 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 SNX5Q9Y5X3 404 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 R4GMQ9 66 aa6.29□□□□□ -1.4
VPS50-204ENST00000438395 hADV38S2A0JD32 116 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 CCDC182A6NF36 153 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 VGLL3A8MV65 326 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 SYT7O43581 403 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 NOS1APO75052 506 aaPredicted RBP6.28□□□□□ -1.4
VPS50-204ENST00000438395 RPP14O95059 124 aaKnown RBP6.28□□□□□ -1.4
VPS50-204ENST00000438395 TTRP02766 147 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 PF4V1P10720 104 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 GABRR1P24046 479 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 MPZP25189 248 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 COL10A1Q03692 680 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 IL24Q13007 206 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 IL18R1Q13478 541 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 ODF4Q2M2E3 257 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 FBLN7Q53RD9 439 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 ZBTB49Q6ZSB9 765 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 MEPCEQ7L2J0 689 aaKnown RBP6.28□□□□□ -1.4
VPS50-204ENST00000438395 KRT74Q7RTS7 529 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 LHFPL4Q7Z7J7 247 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 TMEM179BQ7Z7N9 219 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 ANGPTL5Q86XS5 388 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 NDUFA11Q86Y39 141 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 Q8IYB0 196 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 ENTHD1Q8IYW4 607 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 ELMOD2Q8IZ81 293 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 OR8H2Q8N162 312 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 LYG1Q8N1E2 194 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 MRAPQ8TCY5 172 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 CFHR4Q92496 578 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 EMG1Q92979 244 aaKnown RBP6.28□□□□□ -1.4
VPS50-204ENST00000438395 MALSU1Q96EH3 234 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 NRBF2Q96F24 287 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 BORCS8Q96FH0 119 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 ZNF714Q96N38 554 aa6.28□□□□□ -1.4
VPS50-204ENST00000438395 PKIBQ9C010 78 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms