RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 COX5BP10606 129 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 GABRR1P24046 479 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 GLP1RP43220 463 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 GAMTQ14353 236 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 C10orf128Q5T292 105 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 MAFAQ8NHW3 353 aaPredicted RBP9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 DTD1Q8TEA8 209 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 ZNF799Q96GE5 643 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 NMES1Q9C002 83 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 PARP12Q9H0J9 701 aaKnown RBP9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 RHOFQ9HBH0 211 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 CRLF2Q9HC73 371 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 GPR173Q9NS66 373 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 ZNF701Q9NV72 531 aaPredicted RBP9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 PILRBQ9UKJ0 227 aa9.09□□□□□ -0.95
CLSTN1-203ENST00000435891 TRBV6-7A0A0A0MS04 114 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 A0A1B0GV50 99 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 KNG1P01042 644 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 MT-ND4LP03901 98 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 HOXB5P09067 269 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 FGF5P12034 268 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 FPR2P25090 351 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 OR3A2P47893 321 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 TAS2R31P59538 309 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 PNLIPRP3Q17RR3 467 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 REC114Q7Z4M0 266 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 GALNTL5Q7Z4T8 443 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 HLA-CQ95604 372 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 CHST5Q9GZS9 411 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 FOXD3Q9UJU5 478 aaPredicted RBP9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 V9GYS6 101 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 NCKAP5O14513 1909 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 TEX13DA0A0J9YY54 714 aaPredicted RBP9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 OTX1P32242 354 aaPredicted RBP9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 GUCA1AP43080 201 aaPredicted RBP9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 RAB32Q13637 225 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 PHYHIPLQ96FC7 376 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 ANGPTL4Q9BY76 406 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 LIME1Q9H400 295 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 SEBOXQ9HB31 216 aaPredicted RBP9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 FAM86C1Q9NVL1 165 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 AHCTF1Q8WYP5 2266 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 F8VVB4 439 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 F8VWA3 439 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 SPRY1O43609 319 aaPredicted RBP9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 PDGFBP01127 241 aaPredicted RBP9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 OR8G1Q15617 311 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 KDF1Q8NAX2 398 aaPredicted RBP9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 RNF141Q8WVD5 230 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 SEC11CQ9BY50 192 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 GSKIPQ9P0R6 139 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 DNAJB11Q9UBS4 358 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 SHANK1Q9Y566 2161 aa9.08□□□□□ -0.96
CLSTN1-203ENST00000435891 IGKV1-27A0A075B6S5 117 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 A0A0U1RQV5 110 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 A0A1B0GWJ7 208 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 MED6O75586 246 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 SERPINA5P05154 406 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF25P17030 456 aaPredicted RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 PTGER4P35408 488 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 RRADP55042 308 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 PMS2CLQ68D20 193 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 BRICD5Q6PL45 260 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 UNQ6494/PRO21346Q6UXR6 183 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 YRDCQ86U90 279 aaKnown RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 C20orf196Q8IYI0 205 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 TMEM156Q8N614 296 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 C15orf54Q8N8G6 183 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 DYRK2Q92630 601 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 HAS2Q92819 552 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 S100A13Q99584 98 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 ULBP2Q9BZM5 246 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 WDR54Q9H977 334 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 DKKL1Q9UK85 242 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 CCDC85CA6NKD9 419 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 THBS4P35443 961 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 ALDH3B1P43353 468 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 RPS18P62269 152 aaKnown RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 HIST1H3AP68431 136 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF674Q2M3X9 581 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 HIST2H3PS2Q5TEC6 136 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 OPN5Q6U736 354 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 FOXL2NBQ6ZUU3 175 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 HIST2H3AQ71DI3 136 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 MARS2Q96GW9 593 aaKnown RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 CDC6Q99741 560 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 METTL8Q9H825 291 aaKnown RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 SH2D2AQ9NP31 389 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 FIGNL2A6NMB9 653 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF705GA8MUZ8 300 aaPredicted RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNHIT1O43257 154 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 TPT1P13693 172 aaKnown RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 RAB5AP20339 215 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 SSR4P51571 173 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 DSCR4P56555 118 aaPredicted RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF774Q6NX45 483 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 SLC16A14Q7RTX9 510 aa9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 RPS19BP1Q86WX3 136 aaKnown RBP9.07□□□□□ -0.96
CLSTN1-203ENST00000435891 SEMA6DQ8NFY4 1073 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms