RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ALX3O95076 343 aa13.4□□□□□ -0.26
SMPD4-207ENST00000435455 CD2P06729 351 aa13.4□□□□□ -0.26
SMPD4-207ENST00000435455 POU3F4P49335 361 aa13.4□□□□□ -0.26
SMPD4-207ENST00000435455 C1orf122Q6ZSJ8 110 aa13.4□□□□□ -0.26
SMPD4-207ENST00000435455 BATF2Q8N1L9 274 aa13.4□□□□□ -0.26
SMPD4-207ENST00000435455 STX19Q8N4C7 294 aa13.4□□□□□ -0.26
SMPD4-207ENST00000435455 GPR148Q8TDV2 347 aa13.4□□□□□ -0.26
SMPD4-207ENST00000435455 VCX3BQ9H321 246 aa13.4□□□□□ -0.26
SMPD4-207ENST00000435455 CENPVL3A0A0U1RRI6 287 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 M0R1W7 72 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 OGG1O15527 345 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 SULT1B1O43704 296 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 INMTO95050 263 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 AQP4P55087 323 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 PDZK1IP1Q13113 114 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 XAF1Q6GPH4 301 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 LAIR2Q6ISS4 152 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 FIP1L1Q6UN15 594 aaKnown RBP13.39□□□□□ -0.27
SMPD4-207ENST00000435455 BRD3OSQ6XYD6 125 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 BPIFB6Q8NFQ5 453 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 TBC1D15Q8TC07 691 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 FAM216AQ8WUB2 273 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 NRG4Q8WWG1 115 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 GATAD2BQ8WXI9 593 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 EMG1Q92979 244 aaKnown RBP13.39□□□□□ -0.27
SMPD4-207ENST00000435455 LHX4Q969G2 390 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 SMIM19Q96E16 107 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 FAM234AQ9H0X4 552 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 ZMAT3Q9HA38 289 aaKnown RBP13.39□□□□□ -0.27
SMPD4-207ENST00000435455 SEBOXQ9HB31 216 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-207ENST00000435455 ESM1Q9NQ30 184 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 CLEC2DQ9UHP7 191 aa13.39□□□□□ -0.27
SMPD4-207ENST00000435455 IGHV1-69DA0A0B4J2H0 117 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 F8VVB4 439 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 F8VWA3 439 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 IGHV1-69P01742 117 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 CHRM2P08172 466 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 HCKP08631 526 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 CEBPDP49716 269 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-207ENST00000435455 TAS2R43P59537 309 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 UBA52P62987 128 aaKnown RBP13.38□□□□□ -0.27
SMPD4-207ENST00000435455 BAMBIQ13145 260 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 BLMHQ13867 455 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 METAP1DQ6UB28 335 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-207ENST00000435455 AHSA2Q719I0 299 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 SAXO1Q8IYX7 474 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 FAM58AQ8N1B3 248 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 ZDHHC22Q8N966 263 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 RGP1Q92546 391 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-207ENST00000435455 RFT1Q96AA3 541 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 CPNE2Q96FN4 548 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-207ENST00000435455 ZNF48Q96MX3 618 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-207ENST00000435455 ELL3Q9HB65 397 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-207ENST00000435455 RHOFQ9HBH0 211 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 ZNF281Q9Y2X9 895 aa13.38□□□□□ -0.27
SMPD4-207ENST00000435455 A0A1W2PPH5 198 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 K7N7A8 449 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 SPRY1O43609 319 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-207ENST00000435455 TK1P04183 234 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 PRTN3P24158 256 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 SOX2P48431 317 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 RPL31P62899 125 aaKnown RBP13.37□□□□□ -0.27
SMPD4-207ENST00000435455 DMKNQ6E0U4 476 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-207ENST00000435455 FAM185AQ8N0U4 392 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 Q8N7P7 452 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-207ENST00000435455 ASCC1Q8N9N2 400 aaKnown RBP13.37□□□□□ -0.27
SMPD4-207ENST00000435455 ZNF485Q8NCK3 441 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 SPACA5Q96QH8 159 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 METTL8Q9H825 291 aaKnown RBP13.37□□□□□ -0.27
SMPD4-207ENST00000435455 UNKLQ9H9P5 680 aaKnown RBP13.37□□□□□ -0.27
SMPD4-207ENST00000435455 GLS2Q9UI32 602 aa13.37□□□□□ -0.27
SMPD4-207ENST00000435455 DNAJC9-AS1A6NH13 148 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 MYL12BO14950 172 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 MAGEB3O15480 346 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 LALBAP00709 142 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 PRKACAP17612 351 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 RAB3AP20336 220 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 BCL3P20749 454 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 NPBWR2P48146 333 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 HSPA13P48723 471 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 ACTG1P63261 375 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 GUCA2AQ02747 115 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 COL10A1Q03692 680 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 KISS1Q15726 138 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 DEFB112Q30KQ8 113 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 SPIN3Q5JUX0 258 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 C6orf141Q5SZD1 244 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 ZNF529Q6P280 563 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 ZSCAN4Q8NAM6 433 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-207ENST00000435455 OR5D13Q8NGL4 314 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 TMEM106AQ96A25 262 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 SNX22Q96L94 193 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 PRDM13Q9H4Q3 707 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 NOX4Q9NPH5 578 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 SIRT7Q9NRC8 400 aa13.36□□□□□ -0.27
SMPD4-207ENST00000435455 RBFOX1Q9NWB1 397 aaKnown RBP13.36□□□□□ -0.27
SMPD4-207ENST00000435455 FKBP14Q9NWM8 211 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms