RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 RNF115Q9Y4L5 304 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 TLN2Q9Y4G6 2542 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 TRAV18A0A075B6X5 111 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 A0A1W2PQ09 198 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 PLSCR5A0PG75 271 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 ISPDA4D126 451 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 DEFB108AA8MXU0 73 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 RAB27BO00194 218 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 SIAH2O43255 324 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 GSTZ1O43708 216 aaPredicted RBP9.56□□□□□ -0.88
LINC00539-203ENST00000434601 SYNGR1O43759 233 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 OR4A8P0C604 315 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 GTF2F2P13984 249 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 VEGFCP49767 419 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 ZNF154Q13106 437 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 ADIPOQQ15848 244 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 NKPD1Q17RQ9 610 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 RNASE12Q5GAN4 147 aaKnown RBP9.56□□□□□ -0.88
LINC00539-203ENST00000434601 FAM76BQ5HYJ3 339 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 CLEC9AQ6UXN8 241 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 OR2Z1Q8NG97 314 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 OR56B1Q8NGI3 324 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 OR51T1Q8NGJ9 327 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 SMIM4Q8WVI0 70 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 GTF3AQ92664 365 aaKnown RBP9.56□□□□□ -0.88
LINC00539-203ENST00000434601 TRIM63Q969Q1 353 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 SLAMF9Q96A28 289 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 MRPS24Q96EL2 167 aaKnown RBP9.56□□□□□ -0.88
LINC00539-203ENST00000434601 Q96M66 194 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 PLK3Q9H4B4 646 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 AUNIPQ9H7T9 357 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 POLDIP2Q9Y2S7 368 aa9.56□□□□□ -0.88
LINC00539-203ENST00000434601 VGLL3A8MV65 326 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 VSTM5A8MXK1 200 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 F5H5P2 479 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 TRAPPC2LH3BP13 241 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 GABARAPH6UMI1 98 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 SFTPBP07988 381 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 BCL3P20749 454 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 LOXP28300 417 aaPredicted RBP9.55□□□□□ -0.88
LINC00539-203ENST00000434601 CD200P41217 278 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 DEFA1P59665 94 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 DEFA3P59666 94 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 DGCR2P98153 550 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 RGS21Q2M5E4 152 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 ELP2Q6IA86 826 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 LRRC75A-AS1Q8N1F1 130 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 OSR2Q8N2R0 312 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 FAM89BQ8N5H3 189 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 SCCPDHQ8NBX0 429 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 CHST4Q8NCG5 386 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 Q8NFD4 153 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 OR10R2Q8NGX6 335 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 AQP3Q92482 292 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 GCDHQ92947 438 aaPredicted RBP9.55□□□□□ -0.88
LINC00539-203ENST00000434601 YIPF5Q969M3 257 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 ELMOD3Q96FG2 381 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 TLNRD1Q9H1K6 362 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 ZANQ9Y493 2812 aa9.55□□□□□ -0.88
LINC00539-203ENST00000434601 HIVEP2P31629 2446 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 TMEM235A6NFC5 223 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 A6NLC8 198 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 FOXI3A8MTJ6 420 aaPredicted RBP9.54□□□□□ -0.88
LINC00539-203ENST00000434601 E7EQL1 145 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 SOCS1O15524 211 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 AKR7A2O43488 359 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 SPRY3O43610 288 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 PTBP3O95758 552 aaKnown RBP9.54□□□□□ -0.88
LINC00539-203ENST00000434601 HEXAP06865 529 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 GRPP07492 148 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 GSTP1P09211 210 aaKnown RBP9.54□□□□□ -0.88
LINC00539-203ENST00000434601 CD3GP09693 182 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 PTHLHP12272 177 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 HIST1H1DP16402 221 aaKnown RBP9.54□□□□□ -0.88
LINC00539-203ENST00000434601 NPBWR2P48146 333 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 INPP1P49441 399 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 ZNF81P51508 661 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 RBM11P57052 281 aaKnown RBP9.54□□□□□ -0.88
LINC00539-203ENST00000434601 FGF12P61328 243 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 SCN1BQ07699 218 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 MAB21L1Q13394 359 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 PIGYQ3MUY2 71 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 ZNF260Q3ZCT1 412 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 HACD4Q5VWC8 232 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 PRAMEF6Q5VXH4 476 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 Q6ZTK2 550 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 FBXL14Q8N1E6 418 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 BATF2Q8N1L9 274 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 C19orf18Q8NEA5 215 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 OR52I2Q8NH67 350 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 SETD6Q8TBK2 473 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 RAB3CQ96E17 227 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 PIK3IP1Q96FE7 263 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 HS3ST6Q96QI5 342 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 TMEM204Q9BSN7 226 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 THAP7Q9BT49 309 aaPredicted RBP9.54□□□□□ -0.88
LINC00539-203ENST00000434601 SCPEP1Q9HB40 452 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 RHOFQ9HBH0 211 aa9.54□□□□□ -0.88
LINC00539-203ENST00000434601 RBFOX1Q9NWB1 397 aaKnown RBP9.54□□□□□ -0.88
LINC00539-203ENST00000434601 MTCH1Q9NZJ7 389 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms