RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 C12orf4Q9NQ89 552 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF355PQ9NSJ1 428 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 TREX1Q9NSU2 369 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 KLF13Q9Y2Y9 288 aaPredicted RBP1.64□□□□□ -2.15
PTPN4-205ENST00000433888 ATP6V1DQ9Y5K8 247 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 NLRC5Q86WI3 1866 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 VWA8A3KMH1 1905 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 IGSF9BQ9UPX0 1349 aa1.64□□□□□ -2.15
PTPN4-205ENST00000433888 ANKRD12Q6UB98 2062 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 IGHV3-72A0A0B4J1Y9 119 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 PSPHP1O15172 72 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 SOCS1O15524 211 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 RBFOX2O43251 390 aaKnown RBP eCLIP1.63□□□□□ -2.15
PTPN4-205ENST00000433888 CBR3O75828 277 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 MYO1DO94832 1006 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 CTDNEP1O95476 244 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 YEATS4O95619 227 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 FADS2O95864 444 aaKnown RBP1.63□□□□□ -2.15
PTPN4-205ENST00000433888 SEC11BP0C7V7 166 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 PET100P0DJ07 73 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF14P17017 642 aaPredicted RBP1.63□□□□□ -2.15
PTPN4-205ENST00000433888 CELP19835 753 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 TAC1P20366 129 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 PSMB6P28072 239 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 CRATP43155 626 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 PSMB2P49721 201 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 CLDN12P56749 244 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ELF3P78545 371 aaPredicted RBP1.63□□□□□ -2.15
PTPN4-205ENST00000433888 OR4D1Q15615 310 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 CEACAM16Q2WEN9 425 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 CDNFQ49AH0 187 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ZFP1Q6P2D0 407 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF773Q6PK81 442 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 WDR86Q86TI4 376 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 CRLF3Q8IUI8 442 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 BBS7Q8IWZ6 715 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF709Q8N972 641 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ATP6V1C2Q8NEY4 427 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 OR4K17Q8NGC6 315 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 OR10Z1Q8NGY1 313 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 OR1S1Q8NH92 325 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ACTL9Q8TC94 416 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 L3HYPDHQ96EM0 354 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ZBED3Q96IU2 234 aaPredicted RBP1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF2Q9BSG1 426 aaPredicted RBP1.63□□□□□ -2.15
PTPN4-205ENST00000433888 EMC6Q9BV81 110 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 OR52A5Q9H2C5 316 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ASB7Q9H672 318 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 HMG20AQ9NP66 347 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ZNRD1Q9P1U0 126 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 MARCOQ9UEW3 520 aaPredicted RBP1.63□□□□□ -2.15
PTPN4-205ENST00000433888 OPN4Q9UHM6 478 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 BTRCQ9Y297 605 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ACOT9Q9Y305 439 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 MIA3Q5JRA6 1907 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 LOXHD1Q8IVV2 1947 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 ADAMTS13Q76LX8 1427 aa1.63□□□□□ -2.15
PTPN4-205ENST00000433888 LRPPRCP42704 1394 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 IGLV1-50A0A075B6I6 118 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 IGHV3-49A0A0A0MS15 119 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 A0A0G2JMP0 313 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 A0A0X1KG70 313 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 A0A1B0GX12 115 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 KLRC4-KLRK1H3BQV0 150 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF593O00488 134 aaPredicted RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF207O43670 478 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 EIF1BO60739 113 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 YIF1AO95070 293 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 IGKV1-39P01597 117 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 IGHV3-11P01762 117 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 IGKV1D-39P04432 117 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 ZNF688P0C7X2 276 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 LINC00869P0C866 280 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 PVALBP20472 110 aaPredicted RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 PSMB5P28074 263 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 TSPOP30536 169 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 EIF1P41567 113 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 CDC34P49427 236 aaPredicted RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 PLTPP55058 493 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 RAB38P57729 211 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 MYL6P60660 151 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 RHOAP61586 193 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 TSPAN5P62079 268 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 PPP1CAP62136 330 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 PITPNAQ00169 270 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 CD164Q04900 197 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 PRDX1Q06830 199 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 ITGB3BPQ13352 177 aaPredicted RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 MAPRE2Q15555 327 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 EXOC3L4Q17RC7 722 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 CEACAM21Q3KPI0 293 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 KLHL12Q53G59 568 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 TRMT10CQ7L0Y3 403 aaKnown RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 LRP11Q86VZ4 500 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 ERO1BQ86YB8 467 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 PLCZ1Q86YW0 608 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 RIBC1Q8N443 379 aaPredicted RBP1.62□□□□□ -2.15
PTPN4-205ENST00000433888 OR2M7Q8NG81 312 aa1.62□□□□□ -2.15
PTPN4-205ENST00000433888 ZFAND1Q8TCF1 268 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms