RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SLC25A24Q6NUK1 477 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 SPSB3Q6PJ21 355 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 Q6ZSR6 202 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 SLC46A1Q96NT5 459 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 CABLES2Q9BTV7 478 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 ANAPC10Q9UM13 185 aa10.12□□□□□ -0.79
HMGCS1-202ENST00000433297 C9J4A7 227 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 EREGO14944 169 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 ANGPTL7O43827 346 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 SFTPDP35247 375 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 CD200P41217 278 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 CLRN1P58418 232 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 ICAM4Q14773 271 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 PDCD1Q15116 288 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 H1FNTQ75WM6 255 aaPredicted RBP10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 GRINAQ7Z429 371 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 OR2C3Q8N628 320 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 KCNK17Q96T54 332 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 GPR87Q9BY21 358 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 NAA60Q9H7X0 242 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 ZNF581Q9P0T4 197 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 FBLN5Q9UBX5 448 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 GAB2Q9UQC2 676 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 PHF3Q92576 2039 aaKnown RBP10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 A8MWP6 167 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 TMEM150CB9EJG8 249 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 HSPA12AO43301 675 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 SSSCA1O60232 199 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 GZMBP10144 247 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 CTSEP14091 401 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 FAHP16930 419 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 CSNK1A1P48729 337 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 FAM189A2Q15884 450 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 OR5C1Q8NGR4 320 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 PGAM5Q96HS1 289 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 NEU1Q99519 415 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 ANXA10Q9UJ72 324 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 RP1P56715 2156 aa10.11□□□□□ -0.79
HMGCS1-202ENST00000433297 NPIPB7O75200 414 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 ZNF17P17021 662 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 FOXL2P58012 376 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 VAMP2P63027 116 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 IGLV3-21P80748 117 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 TMEM187Q14656 261 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 MPV17LQ2QL34 196 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 C1orf189Q5VU69 101 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 SHISA6Q6ZSJ9 500 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 CMTM1Q8IZ96 169 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 SLC38A9Q8NBW4 561 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 GPHA2Q96T91 129 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 MRPL37Q9BZE1 423 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 PLA2G2FQ9BZM2 168 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 DUSP15Q9H1R2 295 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 TBX21Q9UL17 535 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 NUTF2P61970 127 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 GABREP78334 506 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 ZNF266Q14584 549 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 TMEM196Q5HYL7 178 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 WDR25Q64LD2 544 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 LRP11Q86VZ4 500 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 LGI3Q8N145 548 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 DDA1Q9BW61 102 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 LRFN1Q9P244 771 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 KIAA1456Q9P272 454 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 TP53TG5Q9Y2B4 290 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 A0A087WWC5 75 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 FRG2CA6NGY1 282 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 SERPINE3A8MV23 424 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 HOXB2P14652 356 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 ZNF25P17030 456 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 RNF4P78317 190 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 BATF2Q8N1L9 274 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 SLC35G3Q8N808 338 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 SNIP1Q8TAD8 396 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 UCK1Q9HA47 277 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 SIRT7Q9NRC8 400 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 SLC2A9Q9NRM0 540 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 LHFPL6Q9Y693 200 aa10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 TDRD6O60522 2096 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-202ENST00000433297 E9PLN8 166 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 CLDN34H7C241 214 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 PGA3P0DJD8 388 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 COX5BP10606 129 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 IL13RA2Q14627 380 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 MYO7BQ6PIF6 2116 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 FBXL14Q8N1E6 418 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 WFIKKN1Q96NZ8 548 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 IGSF23A1L1A6 192 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 NKX2-6A6NCS4 301 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 CCDC85CA6NKD9 419 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 ALG1L2C9J202 215 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 COL9A1P20849 921 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 FOXO1Q12778 655 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 NSDHLQ15738 373 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 SPIN3Q5JUX0 258 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 LCN15Q6UWW0 184 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 LIAT1Q6ZQX7 453 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms