RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 EXOSC1Q9Y3B2 195 aaKnown RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 MAB21L2Q9Y586 359 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PCDHGB5Q9Y5G0 923 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF469Q96JG9 3925 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 TEP1Q99973 2627 aaKnown RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CELSR1Q9NYQ6 3014 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 PPIAL4CA0A0B4J2A2 164 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 A0A1W2PRD5 423 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 A0A1W2PRF3 423 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 A0A1W2PRM7 423 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 MEX3AA1L020 520 aaKnown RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 NKX6-3A6NJ46 265 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 TMEM212A6NML5 194 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 DHRS7CA6NNS2 312 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 A8MXK9 166 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 H0YJX3 145 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 H3BS24 57 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 J3QT63 122 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 SLC1A7O00341 560 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 MYL12BO14950 172 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 OGG1O15527 345 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 TOX4O94842 621 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CYB5AP00167 134 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CDK1P06493 297 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 SFTPBP07988 381 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 PGA5P0DJD9 388 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 PPIAL4GP0DN37 164 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 TMEM225BP0DP42 221 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 BCL3P20749 454 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 PRKACBP22694 351 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 MYF6P23409 242 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 GATA3P23771 443 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CPT2P23786 658 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CFHR2P36980 270 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 NPBWR2P48146 333 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 DLX1P56177 255 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 IL13RA1P78552 427 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 PAX2Q02962 417 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 IL24Q13007 206 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 MRPL28Q13084 256 aaKnown RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CDK5R1Q15078 307 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 MED22Q15528 200 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CCDC58Q4VC31 144 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 LRRC10Q5BKY1 277 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 KLF17Q5JT82 389 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ATPAF1Q5TC12 328 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 STUMQ69YW2 141 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 BRD3OSQ6XYD6 125 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF788Q6ZQV5 615 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 C1QL2Q7Z5L3 287 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 MKXQ8IYA7 352 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 PNLDC1Q8NA58 520 aaKnown RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 POC1AQ8NBT0 407 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR4M1Q8NGD0 313 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 OR5D14Q8NGL3 314 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 RGP1Q92546 391 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 GHSRQ92847 366 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 MYDGFQ969H8 173 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ITFG2Q969R8 447 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 C12orf43Q96C57 262 aaKnown RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 C10orf35Q96D05 121 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CEP19Q96LK0 163 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 OPALINQ96PE5 141 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 GPER1Q99527 375 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 SLC6A7Q99884 636 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 JAM3Q9BX67 310 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 PKIBQ9C010 78 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 MS4A7Q9GZW8 240 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 VCX3BQ9H321 246 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CNTD2Q9H8S5 307 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ING3Q9NXR8 418 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 TAS2R4Q9NYW5 299 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 CNOT2Q9NZN8 540 aaKnown RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ONECUT1Q9UBC0 465 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 KAAG1Q9UBP8 84 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 SLC25A10Q9UBX3 287 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF69Q9UC07 566 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ING4Q9UNL4 249 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ERGIC3Q9Y282 383 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 POLDIP2Q9Y2S7 368 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF281Q9Y2X9 895 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 SF3B6Q9Y3B4 125 aaKnown RBP4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 TPRKBQ9Y3C4 175 aa4.77□□□□□ -1.65
HMGB3P24-201ENST00000433260 AKAP9Q99996 3911 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 IGKV1-12A0A0C4DH73 117 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 A0A1W2PQ09 198 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 RNF212BA8MTL3 300 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 ZNF879B4DU55 563 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 MAGEB3O15480 346 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 TCF21O43680 179 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 ENSAO43768 121 aaKnown RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 NOS1APO75052 506 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 VENTXO95231 258 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 ECDO95905 644 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 IGKV1D-12P01611 117 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 MAS1P04201 325 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 LIPFP07098 398 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 HSMCR30P0CW71 290 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 IGHV4-38-2P0DP08 117 aa4.76□□□□□ -1.65
HMGB3P24-201ENST00000433260 PIPP12273 146 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 1068.9 ms