RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 CASTOR1Q8WTX7 329 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 CITED4Q96RK1 184 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 CMSS1Q9BQ75 279 aaKnown RBP11.08□□□□□ -0.64
DDX56-204ENST00000431640 C5orf66Q9H5L9 145 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FN3KRPQ9HA64 309 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 ZNF701Q9NV72 531 aaPredicted RBP11.08□□□□□ -0.64
DDX56-204ENST00000431640 KIF25Q9UIL4 384 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 C14orf166Q9Y224 244 aaKnown RBP11.08□□□□□ -0.64
DDX56-204ENST00000431640 AUP1Q9Y679 476 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 ZNF850A8MQ14 1090 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 WISP2O76076 250 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 OR2F2O95006 317 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 FAM87AP0C7U9 286 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 CCNOP22674 350 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 CHATP28329 748 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 APLNRP35414 380 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 OR2F1Q13607 317 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 ZNF345Q14585 488 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 NHLRC3Q5JS37 347 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 RNFT1Q5M7Z0 435 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 C9orf135Q5VTT2 229 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 KCTD9Q7L273 389 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 SLC51BQ86UW2 128 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 CCDC36Q8IYA8 594 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 RBMXL3Q8N7X1 1067 aaKnown RBP11.07□□□□□ -0.64
DDX56-204ENST00000431640 Q8NFD4 153 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 THAP6Q8TBB0 222 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 ABHD17AQ96GS6 310 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 POM121L2Q96KW2 1035 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 HIST1H2AAQ96QV6 131 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 RTBDNQ9BSG5 229 aaPredicted RBP11.07□□□□□ -0.64
DDX56-204ENST00000431640 FAAP24Q9BTP7 215 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 NMES1Q9C002 83 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 RAB18Q9NP72 206 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 ZNF230Q9UIE0 474 aaPredicted RBP11.07□□□□□ -0.64
DDX56-204ENST00000431640 ANXA10Q9UJ72 324 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 ST3GAL6Q9Y274 331 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 TP53TG5Q9Y2B4 290 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 LIPGQ9Y5X9 500 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 LEUTXA8MZ59 168 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 B3GALNT1O75752 331 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 CFDP00746 253 aaPredicted RBP11.07□□□□□ -0.64
DDX56-204ENST00000431640 CEACAM21Q3KPI0 293 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 AADACL3Q5VUY0 350 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 SIGIRRQ6IA17 410 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 IGFL3Q6UXB1 125 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 OR5A2Q8NGI9 324 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 OR1K1Q8NGR3 316 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 SCARB1Q8WTV0 552 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 GMPPAQ96IJ6 420 aaPredicted RBP11.07□□□□□ -0.64
DDX56-204ENST00000431640 PRORYQ9H606 182 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 NECAP2Q9NVZ3 263 aa11.07□□□□□ -0.64
DDX56-204ENST00000431640 USP24Q9UPU5 2620 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 PKD1L2Q7Z442 2459 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 CNTRLQ7Z7A1 2325 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 PQLC2LA1A4F0 135 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 C5orf51A6NDU8 294 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 TMEM8BA6NDV4 472 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 FAM25EA8MYX2 175 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 J3QW42 95 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 SDCBPO00560 298 aaPredicted RBP11.06□□□□□ -0.64
DDX56-204ENST00000431640 SS18L1O75177 396 aaPredicted RBP11.06□□□□□ -0.64
DDX56-204ENST00000431640 PDCD6O75340 191 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 PLATP00750 562 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 IGHG3P01860 377 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 FUT3P21217 361 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 PRDX4Q13162 271 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 ELP2Q6IA86 826 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 TMEM211Q6ICI0 200 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 DHRS11Q6UWP2 260 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 ACOT7LQ6ZUV0 252 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 P4HA3Q7Z4N8 544 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 TMEM200AQ86VY9 491 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 MKXQ8IYA7 352 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 ZDHHC23Q8IYP9 409 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 FBXL14Q8N1E6 418 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 KCNRGQ8N5I3 272 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 PPP1R1CQ8WVI7 109 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 BCL2L2Q92843 193 aaPredicted RBP11.06□□□□□ -0.64
DDX56-204ENST00000431640 SEC22AQ96IW7 307 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 PAPOLGQ9BWT3 736 aaKnown RBP11.06□□□□□ -0.64
DDX56-204ENST00000431640 DECR2Q9NUI1 292 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 SPRR3Q9UBC9 169 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 AK3Q9UIJ7 227 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 TNFSF18Q9UNG2 199 aa11.06□□□□□ -0.64
DDX56-204ENST00000431640 MAP1BP46821 2468 aaKnown RBP11.05□□□□□ -0.64
DDX56-204ENST00000431640 IGKV1-12A0A0C4DH73 117 aa11.05□□□□□ -0.64
DDX56-204ENST00000431640 RPS10-NUDT3A0A1W2PQS6 291 aa11.05□□□□□ -0.64
DDX56-204ENST00000431640 GEMIN2O14893 280 aaKnown RBP11.05□□□□□ -0.64
DDX56-204ENST00000431640 IGKV1D-12P01611 117 aa11.05□□□□□ -0.64
DDX56-204ENST00000431640 CTSDP07339 412 aaPredicted RBP11.05□□□□□ -0.64
DDX56-204ENST00000431640 PGAM2P15259 253 aa11.05□□□□□ -0.64
DDX56-204ENST00000431640 PSMB6P28072 239 aa11.05□□□□□ -0.64
DDX56-204ENST00000431640 FOXG1P55316 489 aaPredicted RBP11.05□□□□□ -0.64
DDX56-204ENST00000431640 RBM11P57052 281 aaKnown RBP11.05□□□□□ -0.64
DDX56-204ENST00000431640 TGFBR3Q03167 851 aa11.05□□□□□ -0.64
DDX56-204ENST00000431640 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
DDX56-204ENST00000431640 C3AR1Q16581 482 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms