RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 BIVMQ86UB2 503 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 CDH26Q8IXH8 852 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 ZSCAN4Q8NAM6 433 aaPredicted RBP10.34□□□□□ -0.75
USP40-205ENST00000430158 PXT1Q8NFP0 134 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 THRSPQ92748 146 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 SLAMF9Q96A28 289 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 CEP19Q96LK0 163 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 C1orf147Q96MC9 270 aaPredicted RBP10.34□□□□□ -0.75
USP40-205ENST00000430158 SEBOXQ9HB31 216 aaPredicted RBP10.34□□□□□ -0.75
USP40-205ENST00000430158 NLKQ9UBE8 527 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 MIOXQ9UGB7 285 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 ZFHX3Q15911 3703 aa10.34□□□□□ -0.75
USP40-205ENST00000430158 OR2AT4A6NND4 320 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 NDUFA2O43678 99 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 ANGPTL7O43827 346 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 PLATP00750 562 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 SFTPBP07988 381 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 HCKP08631 526 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 SRMP19623 302 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 BCL3P20749 454 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 POU3F4P49335 361 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 GZMKP49863 264 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 GMFBP60983 142 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 PPP3R1P63098 170 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 NEDD8Q15843 81 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 MICBQ29980 383 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 DDI2Q5TDH0 399 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 CYB5R2Q6BCY4 276 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 ELP2Q6IA86 826 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 MKXQ8IYA7 352 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 BATF2Q8N1L9 274 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 CD177Q8N6Q3 437 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 OR5T2Q8NGG2 359 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 OR5D18Q8NGL1 313 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 OR51F2Q8NH61 342 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 TMIGD2Q96BF3 282 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 RAB39BQ96DA2 213 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 SDSLQ96GA7 329 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 GAFA1Q96PS6 74 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 CCL13Q99616 98 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 DNTTIP1Q9H147 329 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 SMURF1Q9HCE7 757 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 SNTG1Q9NSN8 517 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 RBFOX1Q9NWB1 397 aaKnown RBP10.33□□□□□ -0.76
USP40-205ENST00000430158 IL36RNQ9UBH0 155 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 MAB21L2Q9Y586 359 aa10.33□□□□□ -0.76
USP40-205ENST00000430158 B4DSR2 109 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 TRAPPC2LH3BP13 241 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 SELLP14151 372 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 FGF9P31371 208 aaPredicted RBP10.32□□□□□ -0.76
USP40-205ENST00000430158 ZNF93P35789 620 aaPredicted RBP10.32□□□□□ -0.76
USP40-205ENST00000430158 PTGFRP43088 359 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 OR3A4PP47883 348 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 HSD17B12Q53GQ0 312 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 C1orf100Q5SVJ3 147 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 WDR25Q64LD2 544 aaPredicted RBP10.32□□□□□ -0.76
USP40-205ENST00000430158 FAM166AQ6J272 317 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 LURAP1LQ8IV03 231 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 FGFRL1Q8N441 504 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 FAM216BQ8N7L0 139 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 LINC01356Q8N9X3 169 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 YIPF6Q96EC8 236 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 NEIL1Q96FI4 390 aaPredicted RBP10.32□□□□□ -0.76
USP40-205ENST00000430158 CNTD2Q9H8S5 307 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 NEK6Q9HC98 313 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 HMG20AQ9NP66 347 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 IL36GQ9NZH8 169 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 CKLFQ9UBR5 152 aa10.32□□□□□ -0.76
USP40-205ENST00000430158 TRAV1-2A0A0B4J238 106 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 MEGF11A6BM72 1044 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 RFPL4AA6NLU0 287 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 RFPL4AL1F8VTS6 287 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 SIGLEC5O15389 551 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 ADAM20O43506 726 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 NXPH2O95156 264 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 KNG1P01042 644 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 MAS1P04201 325 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 HEXAP06865 529 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 MSMBP08118 114 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 RPS2P15880 293 aaKnown RBP10.31□□□□□ -0.76
USP40-205ENST00000430158 PITPNBP48739 271 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 ZNF146Q15072 292 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 KCNJ8Q15842 424 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 DGUOKQ16854 277 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 SMIM21Q3B7S5 101 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 CLEC9AQ6UXN8 241 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 SATL1Q86VE3 508 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 Q8IYB0 196 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 FAM58AQ8N1B3 248 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 OR4D6Q8NGJ1 314 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 SLC25A28Q96A46 364 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 RHOFQ9HBH0 211 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 DNAJB11Q9UBS4 358 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 PCDHB10Q9UN67 800 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 STUB1Q9UNE7 303 aa10.31□□□□□ -0.76
USP40-205ENST00000430158 NF1P21359 2839 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 PPIAL4CA0A0B4J2A2 164 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 C22orf46C9J442 243 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 MAGEB3O15480 346 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 PHF1O43189 567 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms