RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 AHSA2Q719I0 299 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 SERPINA12Q8IW75 414 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 ZNF561Q8N587 486 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 Q8N7P7 452 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 TMEM185AQ8NFB2 350 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 SPACA5Q96QH8 159 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 MS4A7Q9GZW8 240 aaPredicted RBP13.74□□□□□ -0.21
VRK2-204ENST00000428021 DHDHQ9UQ10 334 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 SPRY1O43609 319 aaPredicted RBP13.73□□□□□ -0.21
VRK2-204ENST00000428021 POU3F4P49335 361 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 PDZK1IP1Q13113 114 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 C6orf141Q5SZD1 244 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 GPR157Q5UAW9 335 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 RUSC1-AS1Q66K80 236 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 DMKNQ6E0U4 476 aaPredicted RBP13.73□□□□□ -0.21
VRK2-204ENST00000428021 ZNF529Q6P280 563 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 MKXQ8IYA7 352 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 KIR3DL3Q8N743 410 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 ZFAND2BQ8WV99 257 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 TSEN15Q8WW01 171 aaKnown RBP13.73□□□□□ -0.21
VRK2-204ENST00000428021 RFT1Q96AA3 541 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 SMIM19Q96E16 107 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 C1orf147Q96MC9 270 aaPredicted RBP13.73□□□□□ -0.21
VRK2-204ENST00000428021 CHCHD3Q9NX63 227 aaKnown RBP13.73□□□□□ -0.21
VRK2-204ENST00000428021 ONECUT1Q9UBC0 465 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 OR14J1Q9UGF5 321 aa13.73□□□□□ -0.21
VRK2-204ENST00000428021 IGKV1-12A0A0C4DH73 117 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 IGKV1D-12P01611 117 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 BCL3P20749 454 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 SOX2P48431 317 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 CAPZA1P52907 286 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 BPIFB3P59826 476 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 MED21Q13503 144 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 PDCD1Q15116 288 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 VMO1Q7Z5L0 202 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 STX19Q8N4C7 294 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.72□□□□□ -0.21
VRK2-204ENST00000428021 ZFP41Q8N8Y5 198 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 OR5D14Q8NGL3 314 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 GPR148Q8TDV2 347 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 LHX4Q969G2 390 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 JMJD8Q96S16 334 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 RBFOX1Q9NWB1 397 aaKnown RBP13.72□□□□□ -0.21
VRK2-204ENST00000428021 IL36RNQ9UBH0 155 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 ZNF281Q9Y2X9 895 aa13.72□□□□□ -0.21
VRK2-204ENST00000428021 TRBV23-1A0A0A0MS06 115 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 MDFIC2A0A1B0GVS7 189 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 SLC1A7O00341 560 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 SULT1B1O43704 296 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 ANGPTL7O43827 346 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 ZNF737O75373 536 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 IGHV1-69P01742 117 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 TK1P04183 234 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 DLX1P56177 255 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 ZP1P60852 638 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 RPS11P62280 158 aaKnown RBP eCLIP13.71□□□□□ -0.21
VRK2-204ENST00000428021 COL10A1Q03692 680 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 C1orf122Q6ZSJ8 110 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 Q8IYB0 196 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 OR51A2Q8NGJ7 313 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 OR13C5Q8NGS8 318 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 GHSRQ92847 366 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 TNFRSF14Q92956 283 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 EMG1Q92979 244 aaKnown RBP13.71□□□□□ -0.21
VRK2-204ENST00000428021 PGLYRP3Q96LB9 341 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 PRDM13Q9H4Q3 707 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 SEBOXQ9HB31 216 aaPredicted RBP13.71□□□□□ -0.21
VRK2-204ENST00000428021 C19orf12Q9NSK7 152 aa13.71□□□□□ -0.21
VRK2-204ENST00000428021 TRBV5-5A0A0J9YX44 114 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 K7N7A8 449 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 KDM4BO94953 1096 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 CDK1P06493 297 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 CHRM2P08172 466 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 OCM2P0CE71 109 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 OCMP0CE72 109 aaPredicted RBP13.7□□□□□ -0.22
VRK2-204ENST00000428021 CALCBP10092 127 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 MYF6P23409 242 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 UBA52P62987 128 aaKnown RBP13.7□□□□□ -0.22
VRK2-204ENST00000428021 PRB3Q04118 309 aaPredicted RBP13.7□□□□□ -0.22
VRK2-204ENST00000428021 KISS1Q15726 138 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 DEFB112Q30KQ8 113 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 METAP1DQ6UB28 335 aaPredicted RBP13.7□□□□□ -0.22
VRK2-204ENST00000428021 RBMS3Q6XE24 437 aaKnown RBP13.7□□□□□ -0.22
VRK2-204ENST00000428021 CMTM4Q8IZR5 234 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 FAM58AQ8N1B3 248 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 NANOGP1Q8N7R0 232 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 OR5D18Q8NGL1 313 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 FAM216AQ8WUB2 273 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 SGCDQ92629 289 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 FAM234AQ9H0X4 552 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 HMG20AQ9NP66 347 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 SIRT7Q9NRC8 400 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 PAK1IP1Q9NWT1 392 aaPredicted RBP13.7□□□□□ -0.22
VRK2-204ENST00000428021 TAS2R4Q9NYW5 299 aa13.7□□□□□ -0.22
VRK2-204ENST00000428021 TENM1Q9UKZ4 2725 aa13.69□□□□□ -0.22
VRK2-204ENST00000428021 DSCAML1Q8TD84 2053 aa13.69□□□□□ -0.22
VRK2-204ENST00000428021 A0A1W2PQ09 198 aa13.69□□□□□ -0.22
VRK2-204ENST00000428021 TMEM82A0PJX8 343 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms