RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 EHFQ9NZC4 300 aa9.38□□□□□ -0.91
TCOF1-204ENST00000427724 TRBV23-1A0A0A0MS06 115 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 OR2F2O95006 317 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 SERPINE2P07093 398 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 RAG2P55895 527 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 FAM27E3Q08E93 113 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 OR2F1Q13607 317 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 ATRAIDQ6UW56 229 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 SLC25A26Q70HW3 274 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 ADGRE4PQ86SQ3 457 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 OR6S1Q8NH40 331 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 HGDQ93099 445 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 RAB3CQ96E17 227 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 SLC25A21Q9BQT8 299 aaPredicted RBP9.37□□□□□ -0.91
TCOF1-204ENST00000427724 ABHD6Q9BV23 337 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 NELFAQ9H3P2 528 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 WDR87Q6ZQQ6 2873 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 JMJD1CQ15652 2540 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 B2MP61769 119 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 PPP1CBP62140 327 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 P2RY6Q15077 328 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 EMC4Q5J8M3 183 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 BTNL3Q6UXE8 466 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 CMTM1Q8IZ96 169 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 OR2AE1Q8NHA4 323 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 CMBLQ96DG6 245 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF385AQ96PM9 386 aaKnown RBP9.37□□□□□ -0.91
TCOF1-204ENST00000427724 RSRP1Q9BUV0 290 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 TINAGL1Q9GZM7 467 aaPredicted RBP9.37□□□□□ -0.91
TCOF1-204ENST00000427724 FN3KRPQ9HA64 309 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 HEATR5BQ9P2D3 2071 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 H3BMH7 237 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 K7ENP7 123 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 PTP4A3O75365 173 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 PMP2P02689 132 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 DOC2BQ14184 412 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 INO80CQ6PI98 192 aaPredicted RBP9.37□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF573Q86YE8 665 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 NUDCD2Q8WVJ2 157 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 KCNJ15Q99712 375 aa9.37□□□□□ -0.91
TCOF1-204ENST00000427724 PURGQ9UJV8 347 aaKnown RBP9.37□□□□□ -0.91
TCOF1-204ENST00000427724 A0A1W2PQD3 144 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 NKX2-6A6NCS4 301 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 MFSD2BA6NFX1 497 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 ARPC3O15145 178 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 XRCC3O43542 346 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 NDUFB6O95139 128 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 PRB1P04280 392 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 OR4E1P0C645 316 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 SLC17A1Q14916 467 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 GLIPR1L1Q6UWM5 242 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 DOK3Q7L591 496 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 OVCH2Q7RTZ1 564 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 ZDHHC23Q8IYP9 409 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 OR10X1Q8NGY0 326 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 ZPLD1Q8TCW7 415 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 RNF115Q9Y4L5 304 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 LIPT2A6NK58 231 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 OGG1O15527 345 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 SLC22A24Q8N4F4 322 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 OR10AC1Q8NH08 325 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF251Q9BRH9 671 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 CSAG2Q9Y5P2 127 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 FLNBO75369 2602 aaKnown RBP9.36□□□□□ -0.91
TCOF1-204ENST00000427724 ANKRD11Q6UB99 2663 aaPredicted RBP9.36□□□□□ -0.91
TCOF1-204ENST00000427724 COX7A1P24310 79 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF121P58317 390 aaPredicted RBP9.36□□□□□ -0.91
TCOF1-204ENST00000427724 DPPA2Q7Z7J5 298 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 OR4S1Q8NGB4 309 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 OR56B2PQ8NGI1 322 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 JAM3Q9BX67 310 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 MSL2Q9HCI7 577 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 SLC7A10Q9NS82 523 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 HAO2Q9NYQ3 351 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 AQP8O94778 261 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 IFNA10P01566 189 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 TK1P04183 234 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 THY1P04216 161 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 GLI4P10075 376 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 FAHP16930 419 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 EPHA1P21709 976 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 SNRPNP63162 240 aaKnown RBP9.36□□□□□ -0.91
TCOF1-204ENST00000427724 WDR38Q5JTN6 314 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 BAP18Q8IXM2 172 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 APCDD1LQ8NCL9 501 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 NPEPL1Q8NDH3 523 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 OPN4Q9UHM6 478 aa9.36□□□□□ -0.91
TCOF1-204ENST00000427724 TMEM218A2RU14 115 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 KLF7O75840 302 aaPredicted RBP9.35□□□□□ -0.91
TCOF1-204ENST00000427724 OR13C7P0DN81 318 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 NPY4RP50391 375 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 GUCA2BQ16661 112 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 PLPPR5Q32ZL2 321 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 CLEC9AQ6UXN8 241 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 SUMF2Q8NBJ7 301 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 SF3B5Q9BWJ5 86 aaKnown RBP9.35□□□□□ -0.91
TCOF1-204ENST00000427724 AICDAQ9GZX7 198 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 CHRNA10Q9GZZ6 450 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 ST6GALNAC2Q9UJ37 374 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms