RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 PRKACBP22694 351 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 DCKP27707 260 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 DUSP1P28562 367 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 RBP2P50120 134 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 COL10A1Q03692 680 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 SLC34A1Q06495 639 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 PDCD1Q15116 288 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 CRIP3Q6Q6R5 217 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 C9orf139Q6ZV77 190 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 EGFL6Q8IUX8 553 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 PNKDQ8N490 385 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 ZFP41Q8N8Y5 198 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 FAM216AQ8WUB2 273 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 EMG1Q92979 244 aaKnown RBP12.22□□□□□ -0.45
RTN4-210ENST00000427710 ZDHHC16Q969W1 377 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 TMEM80Q96HE8 168 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 OPALINQ96PE5 141 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 MYCBPQ99417 103 aaPredicted RBP12.22□□□□□ -0.45
RTN4-210ENST00000427710 NKX3-1Q99801 234 aaPredicted RBP12.22□□□□□ -0.45
RTN4-210ENST00000427710 COMMD4Q9H0A8 199 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 ZCCHC4Q9H5U6 513 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 DIMT1Q9UNQ2 313 aaKnown RBP12.22□□□□□ -0.45
RTN4-210ENST00000427710 CAB39Q9Y376 341 aaPredicted RBP12.22□□□□□ -0.45
RTN4-210ENST00000427710 KPTNQ9Y664 436 aa12.22□□□□□ -0.45
RTN4-210ENST00000427710 IGKV1-12A0A0C4DH73 117 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 H0YAE9 185 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 RNASEK-C17orf49H0YIS7 233 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 GPR37O15354 613 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 KNG1P01042 644 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 IGKV1D-12P01611 117 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 PIPP12273 146 aaPredicted RBP12.21□□□□□ -0.45
RTN4-210ENST00000427710 AQP4P55087 323 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 ERVFRD-1P60508 538 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 ST3GAL4Q11206 333 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 IL18R1Q13478 541 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 CDK5R1Q15078 307 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 SLC9A3R2Q15599 337 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 C11orf91Q3C1V1 193 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 TMPRSS11AQ6ZMR5 421 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 LHFPL2Q6ZUX7 228 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 ZNF561Q8N587 486 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 ASCC1Q8N9N2 400 aaKnown RBP12.21□□□□□ -0.45
RTN4-210ENST00000427710 DNAAF1Q8NEP3 725 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 BPIFB6Q8NFQ5 453 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 OR13C5Q8NGS8 318 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 DHDHQ9UQ10 334 aa12.21□□□□□ -0.45
RTN4-210ENST00000427710 EXOSC1Q9Y3B2 195 aaKnown RBP12.21□□□□□ -0.45
RTN4-210ENST00000427710 PNMA8CA0A1B0GUJ8 204 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 IRGMA1A4Y4 181 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 SLC1A7O00341 560 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 HOXA3O43365 443 aaPredicted RBP12.2□□□□□ -0.46
RTN4-210ENST00000427710 PRKACAP17612 351 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 MYL12AP19105 171 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 PRTN3P24158 256 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 MRPL28Q13084 256 aaKnown RBP12.2□□□□□ -0.46
RTN4-210ENST00000427710 PDZK1IP1Q13113 114 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 DOC2BQ14184 412 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 ASPHD2Q6ICH7 369 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 RPL22L1Q6P5R6 122 aaKnown RBP12.2□□□□□ -0.46
RTN4-210ENST00000427710 AHSA2Q719I0 299 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 CMTM4Q8IZR5 234 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 ZFAND2BQ8WV99 257 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 TFAP2CQ92754 450 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 GCDHQ92947 438 aaPredicted RBP12.2□□□□□ -0.46
RTN4-210ENST00000427710 ORAI1Q96D31 301 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 NEK6Q9HC98 313 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 TAS2R4Q9NYW5 299 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 HSPE1-MOB4S4R3N1 261 aa12.2□□□□□ -0.46
RTN4-210ENST00000427710 CMYA5Q8N3K9 4069 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 A0A0U1RQK1 487 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 TMEM82A0PJX8 343 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 HAND1O96004 215 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 TK1P04183 234 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 HCKP08631 526 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 RPSAP08865 295 aaKnown RBP12.19□□□□□ -0.46
RTN4-210ENST00000427710 CCL3L1P16619 93 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 C21orf33P30042 268 aaPredicted RBP12.19□□□□□ -0.46
RTN4-210ENST00000427710 RPL31P62899 125 aaKnown RBP12.19□□□□□ -0.46
RTN4-210ENST00000427710 ZNF273Q14593 569 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 TMEM200BQ69YZ2 307 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 C12orf54Q6X4T0 127 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 FAM58AQ8N1B3 248 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 KIR3DL3Q8N743 410 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 OR51A2Q8NGJ7 313 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 RPS4Y2Q8TD47 263 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 FBLIM1Q8WUP2 373 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 TNFRSF14Q92956 283 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 SPSB1Q96BD6 273 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 CHST6Q9GZX3 395 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 VCXQ9H320 206 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 CHCHD3Q9NX63 227 aaKnown RBP12.19□□□□□ -0.46
RTN4-210ENST00000427710 BABAM2Q9NXR7 383 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 PSORS1C1Q9UIG5 152 aa12.19□□□□□ -0.46
RTN4-210ENST00000427710 TRBV23-1A0A0A0MS06 115 aa12.18□□□□□ -0.46
RTN4-210ENST00000427710 TMEM89A2RUT3 159 aa12.18□□□□□ -0.46
RTN4-210ENST00000427710 EFCAB10A6NFE3 127 aa12.18□□□□□ -0.46
RTN4-210ENST00000427710 K7N7A8 449 aa12.18□□□□□ -0.46
RTN4-210ENST00000427710 OGG1O15527 345 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms