RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SLAMF9Q96A28 289 aa10.42□□□□□ -0.74
SGCE-203ENST00000425444 C4orf36Q96KX1 117 aa10.42□□□□□ -0.74
SGCE-203ENST00000425444 CEP19Q96LK0 163 aa10.42□□□□□ -0.74
SGCE-203ENST00000425444 ALG8Q9BVK2 526 aa10.42□□□□□ -0.74
SGCE-203ENST00000425444 METTL8Q9H825 291 aaKnown RBP10.42□□□□□ -0.74
SGCE-203ENST00000425444 C19orf12Q9NSK7 152 aa10.42□□□□□ -0.74
SGCE-203ENST00000425444 EXOGQ9Y2C4 368 aaKnown RBP10.42□□□□□ -0.74
SGCE-203ENST00000425444 BTBD17A6NE02 478 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 RNASEK-C17orf49H0YIS7 233 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 J3QRE1 110 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 NPFFO15130 113 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 FADS2O95864 444 aaKnown RBP10.41□□□□□ -0.74
SGCE-203ENST00000425444 CYB5AP00167 134 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 PAHP00439 452 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 FBP1P09467 338 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 GABRB1P18505 474 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 POU3F4P49335 361 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 RBP2P50120 134 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 ATP1B3P54709 279 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 KRTAP10-3P60369 221 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 FAM189A2Q15884 450 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 SLC25A26Q70HW3 274 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 LDLRAD3Q86YD5 345 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 CD177Q8N6Q3 437 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 ASCC1Q8N9N2 400 aaKnown RBP10.41□□□□□ -0.74
SGCE-203ENST00000425444 OR5D13Q8NGL4 314 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 OR13C3Q8NGS6 347 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 FGGYQ96C11 551 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 CHIAQ9BZP6 476 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 AMBNQ9NP70 447 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 FAM118AQ9NWS6 357 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 SMPD3Q9NY59 655 aaPredicted RBP10.41□□□□□ -0.74
SGCE-203ENST00000425444 FRRS1LQ9P0K9 344 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 POMT1Q9Y6A1 747 aa10.41□□□□□ -0.74
SGCE-203ENST00000425444 IGKV1-27A0A075B6S5 117 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 CLPSL1A2RUU4 121 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 ANGPTL7O43827 346 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 IGHV4-59P01825 116 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 ISG15P05161 165 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 PIPP12273 146 aaPredicted RBP10.4□□□□□ -0.74
SGCE-203ENST00000425444 AZGP1P25311 298 aaKnown RBP10.4□□□□□ -0.74
SGCE-203ENST00000425444 MTCP1P56278 107 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 NANOS3P60323 173 aaKnown RBP10.4□□□□□ -0.74
SGCE-203ENST00000425444 RPL31P62899 125 aaKnown RBP10.4□□□□□ -0.74
SGCE-203ENST00000425444 COL10A1Q03692 680 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 RAB40BQ12829 278 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 GALEQ14376 348 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 LHFPL2Q6ZUX7 228 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 REC114Q7Z4M0 266 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 LHFPL3Q86UP9 236 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 PNKDQ8N490 385 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 OR4M1Q8NGD0 313 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 RHOXF1Q8NHV9 184 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 EMG1Q92979 244 aaKnown RBP10.4□□□□□ -0.74
SGCE-203ENST00000425444 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
SGCE-203ENST00000425444 ADAT3Q96EY9 351 aaPredicted RBP10.4□□□□□ -0.74
SGCE-203ENST00000425444 PELI1Q96FA3 418 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 DPAGT1Q9H3H5 408 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 HES4Q9HCC6 221 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 INPP5EQ9NRR6 644 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 HHLA2Q9UM44 414 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 MYRFQ9Y2G1 1151 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 RPL36Q9Y3U8 105 aaKnown RBP10.4□□□□□ -0.74
SGCE-203ENST00000425444 PLXNB1O43157 2135 aa10.4□□□□□ -0.74
SGCE-203ENST00000425444 hCG_1809904A0A1W2PP81 198 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 A0A1W2PPE2 198 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 A0A1W2PR64 198 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 A0A1W2PRV1 198 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 MEIOCA2RUB1 952 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 IGHA1P01876 353 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 TK1P04183 234 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 ATF1P18846 271 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 PRKACBP22694 351 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 SAA4P35542 130 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 CCR9P51686 369 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 UBE2E1P51965 193 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 ERVK11-1P61568 191 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 ALKBH1Q13686 389 aaKnown RBP10.39□□□□□ -0.75
SGCE-203ENST00000425444 LRRC36Q1X8D7 754 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 FDX2Q6P4F2 183 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 UTS2BQ765I0 119 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 EGFL6Q8IUX8 553 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 MKXQ8IYA7 352 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 Q8IYB0 196 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 SYS1Q8N2H4 156 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 DNAAF1Q8NEP3 725 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 OR52I1Q8NGK6 324 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 OR13C9Q8NGT0 318 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 SPSB1Q96BD6 273 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 RDH12Q96NR8 316 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 OPALINQ96PE5 141 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 COMMD4Q9H0A8 199 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 FAM234AQ9H0X4 552 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 NEK6Q9HC98 313 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 TCF7L1Q9HCS4 588 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 ERVK13-1Q9NX77 482 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 MTCH1Q9NZJ7 389 aa10.39□□□□□ -0.75
SGCE-203ENST00000425444 ZNRD1Q9P1U0 126 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms