RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 NEDD4LQ96PU5 975 aa8.52□□□□□ -1.05
CD44-207ENST00000425428 ATG5Q9H1Y0 275 aa8.52□□□□□ -1.05
CD44-207ENST00000425428 ZNF701Q9NV72 531 aaPredicted RBP8.52□□□□□ -1.05
CD44-207ENST00000425428 NLKQ9UBE8 527 aa8.52□□□□□ -1.05
CD44-207ENST00000425428 ST3GAL6Q9Y274 331 aa8.52□□□□□ -1.05
CD44-207ENST00000425428 PEX16Q9Y5Y5 336 aa8.52□□□□□ -1.05
CD44-207ENST00000425428 LGALS8O00214 317 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 DEGS1O15121 323 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 RHBDL1O75783 438 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 KNG1P01042 644 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 CHRM2P08172 466 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 CD37P11049 281 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 SLC2A2P11168 524 aaPredicted RBP8.51□□□□□ -1.05
CD44-207ENST00000425428 ZNF44P15621 663 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 PAX1P15863 534 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 MDH2P40926 338 aaKnown RBP8.51□□□□□ -1.05
CD44-207ENST00000425428 PITPNBP48739 271 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 BTG1P62324 171 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 SCN1BQ07699 218 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 RBM39Q14498 530 aaKnown RBP8.51□□□□□ -1.05
CD44-207ENST00000425428 MPV17LQ2QL34 196 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 ASCL4Q6XD76 172 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 ACP7Q6ZNF0 438 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 NLRC3Q7RTR2 1065 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 SAMD12Q8N8I0 201 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 OR10K1Q8NGX5 313 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 C15orf40Q8WUR7 153 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 MED30Q96HR3 178 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 LURAP1Q96LR2 239 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 NRIP2Q9BQI9 281 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 HMG20AQ9NP66 347 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 MTCH1Q9NZJ7 389 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 RABL2AQ9UBK7 228 aaPredicted RBP8.51□□□□□ -1.05
CD44-207ENST00000425428 OR14J1Q9UGF5 321 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 RABL2BQ9UNT1 228 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 A3GALT2U3KPV4 340 aa8.51□□□□□ -1.05
CD44-207ENST00000425428 UTP20O75691 2785 aaKnown RBP8.51□□□□□ -1.05
CD44-207ENST00000425428 FUOMA2VDF0 154 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A10PA6NDY2 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A18PA6NE21 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A16PA6NEW6 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A20PA6NIJ5 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A8PA6NJQ4 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A7PA6NKC0 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A22PA8MWA6 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A12PA8MX19 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A5PA8MXJ8 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A23PA8MXZ1 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 C3orf80F5H4A9 247 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 OR7C1O76099 320 aaPredicted RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A15PP0C7V4 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A13PP0C7W8 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A14PP0C7W9 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM90A24PP0C7X0 464 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 GABRR1P24046 479 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 COL8A2P25067 703 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 SNU13P55769 128 aaKnown RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 IKZF1Q13422 519 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 IL13RA2Q14627 380 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 SFRP4Q6FHJ7 346 aaPredicted RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 FAM166AQ6J272 317 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 C11orf53Q8IXP5 236 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 CHST4Q8NCG5 386 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 DEFB108BQ8NET1 73 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 LGALS14Q8TCE9 139 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 NEK7Q8TDX7 302 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 MBD6Q96DN6 1003 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 GFI1Q99684 422 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 GAL3ST1Q99999 423 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FGF23Q9GZV9 251 aaPredicted RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 DNTTIP1Q9H147 329 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 LIME1Q9H400 295 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 BANF2Q9H503 90 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 RBFOX1Q9NWB1 397 aaKnown RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 FBLN5Q9UBX5 448 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 WIPI2Q9Y4P8 454 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 ANKRD17O75179 2603 aaKnown RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 A0A075B6Q4 140 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 A0A0A6YYH2 397 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 A0A0G2JK05 382 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 TMEM272A0A1B0GTI8 110 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 A6NJ64 397 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 OR2AT4A6NND4 320 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 FSTL3O95633 263 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 LHBP01229 141 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 APOA1P02647 267 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 SFTPBP07988 381 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 VSIG8P0DPA2 414 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 CD80P33681 288 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 MNDAP41218 407 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 NPBWR2P48146 333 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 RBM11P57052 281 aaKnown RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 CNPY1Q3B7I2 92 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 ATAD3CQ5T2N8 411 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 LRRC28Q86X40 367 aaPredicted RBP8.5□□□□□ -1.05
CD44-207ENST00000425428 BATF2Q8N1L9 274 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 GCSAMQ8N6F7 178 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 OR5D13Q8NGL4 314 aa8.5□□□□□ -1.05
CD44-207ENST00000425428 NRGNQ92686 78 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms