RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OR8B4Q96RC9 309 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 NEURL2Q9BR09 285 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 POLR2J2Q9GZM3 115 aaKnown RBP4.83□□□□□ -1.64
SDCBP-203ENST00000424270 POLR2J3Q9H1A7 115 aaKnown RBP4.83□□□□□ -1.64
SDCBP-203ENST00000424270 ABCG5Q9H222 651 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 KLK15Q9H2R5 256 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 PNRC2Q9NPJ4 139 aaKnown RBP4.83□□□□□ -1.64
SDCBP-203ENST00000424270 RPRD1BQ9NQG5 326 aaKnown RBP4.83□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF355PQ9NSJ1 428 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 LIN7CQ9NUP9 197 aaKnown RBP4.83□□□□□ -1.64
SDCBP-203ENST00000424270 ETAA1Q9NY74 926 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 COPS3Q9UNS2 423 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 B9D1Q9UPM9 204 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 PIGLQ9Y2B2 252 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 LINC00312Q9Y6C7 94 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 TRGV10A0A0A0MS01 117 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 hCG_38984A0A1B0GV85 526 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 DCTN6O00399 190 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 DLGAP1O14490 977 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 MMP23AO75900 390 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 CDK2AP2O75956 126 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 RGS11O94810 467 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 NDUFB2O95178 105 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 BPGMP07738 259 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 INAFM2P0DMQ5 153 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 PEX2P28328 305 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 CASQ1P31415 396 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 SOX6P35712 828 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 CDKN2AP42771 156 aaKnown RBP4.82□□□□□ -1.64
SDCBP-203ENST00000424270 SLC1A6P48664 564 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 STX1BP61266 288 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 RUNX1Q01196 453 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 EWSR1Q01844 656 aaKnown RBP eCLIP4.82□□□□□ -1.64
SDCBP-203ENST00000424270 HLA-DRB5Q30154 266 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 PLCXD3Q63HM9 321 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 BAIAP2L2Q6UXY1 529 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 PTCHD4Q6ZW05 846 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 MOB3CQ70IA8 216 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 COMMD2Q86X83 199 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 TGIF2LXQ8IUE1 241 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 Q8N402 240 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 POC1AQ8NBT0 407 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 PROKR2Q8NFJ6 384 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 OR9I1Q8NGQ6 314 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 EPS8L3Q8TE67 593 aaKnown RBP4.82□□□□□ -1.64
SDCBP-203ENST00000424270 UBLCP1Q8WVY7 318 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-203ENST00000424270 AQP3Q92482 292 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 SPSB4Q96A44 273 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 TAMM41Q96BW9 452 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 SLAMF6Q96DU3 332 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 ERMAPQ96PL5 475 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-203ENST00000424270 ARPC5LQ9BPX5 153 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 FNDC11Q9BVV2 318 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 DGCR6LQ9BY27 220 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 CHST6Q9GZX3 395 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 OR51I2Q9H344 312 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 FN3KQ9H479 309 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 VIPAS39Q9H9C1 493 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF286AQ9HBT8 521 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 SLC25A19Q9HC21 320 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 PNPOQ9NVS9 261 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 SLC25A37Q9NYZ2 338 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 OR6C3Q9NZP0 311 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 ZIM2Q9NZV7 527 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 RHCGQ9UBD6 479 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 BAG5Q9UL15 447 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 POLDIP2Q9Y2S7 368 aa4.82□□□□□ -1.64
SDCBP-203ENST00000424270 DMBT1Q9UGM3 2413 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-203ENST00000424270 IGHV3-72A0A0B4J1Y9 119 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 TVP23AA6NH52 213 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 TRPC5OSA6NMA1 111 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 OR11H12B2RN74 326 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF878C9JN71 531 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 INMTO95050 263 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 BPNT1O95861 308 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 CST4P01036 141 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 IGHV3-11P01762 117 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 APOC1P02654 83 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 LGALS1P09382 135 aaKnown RBP4.81□□□□□ -1.64
SDCBP-203ENST00000424270 KITP10721 976 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 DCTDP32321 178 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 YAP1P46937 504 aaKnown RBP4.81□□□□□ -1.64
SDCBP-203ENST00000424270 HAAOP46952 286 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 NPBWR2P48146 333 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 RAB9AP51151 201 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 GRB2P62993 217 aaKnown RBP4.81□□□□□ -1.64
SDCBP-203ENST00000424270 PRKCDQ05655 676 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 BNIP1Q12981 228 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 MADCAM1Q13477 382 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 RBMS2Q15434 407 aaKnown RBP4.81□□□□□ -1.64
SDCBP-203ENST00000424270 GUCA2BQ16661 112 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 SOHLH1Q5JUK2 328 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 SLX4IPQ5VYV7 408 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 FAM122BQ7Z309 247 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 OR8H2Q8N162 312 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 C2CD4CQ8TF44 421 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 HPSE2Q8WWQ2 592 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 TPD52L3Q96J77 140 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 NMNAT3Q96T66 252 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms