RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 SYNGR3O43761 229 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 IGKV3-15P01624 115 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 CELA3BP08861 270 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 GNB3P16520 340 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 IGFBP2P18065 325 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 NAT1P18440 290 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 ARR3P36575 388 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 SLC6A9P48067 706 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 SEC61A1P61619 476 aaKnown RBP12.12□□□□□ -0.47
ACTN4-203ENST00000424234 RAB1AP62820 205 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 ACTBL2Q562R1 376 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 ESCO2Q56NI9 601 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 C1QTNF12Q5T7M4 302 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 ZNF774Q6NX45 483 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 LPCAT3Q6P1A2 487 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 NAA40Q86UY6 237 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 SLC25A42Q86VD7 318 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 OR4S1Q8NGB4 309 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 MUCL1Q96DR8 90 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 RAB3CQ96E17 227 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 ZNF799Q96GE5 643 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 WFIKKN1Q96NZ8 548 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 SPACA5Q96QH8 159 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 OR10A2Q9H208 303 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 PLEK2Q9NYT0 353 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 TIMM10BQ9Y5J6 103 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 AUP1Q9Y679 476 aa12.12□□□□□ -0.47
ACTN4-203ENST00000424234 A0A0A6YYD4 124 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 IGKV1-9A0A0C4DH69 117 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 OR6C6A6NF89 314 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 LEUTXA8MZ59 168 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 SSX5O60225 188 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 SIX6O95475 246 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 IGLV1-44P01699 117 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 CBR1P16152 277 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 HIST1H1DP16402 221 aaKnown RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 ZNF14P17017 642 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 ANOS1P23352 680 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 CBX5P45973 191 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 UBE2MP61081 183 aaKnown RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 RAB14P61106 215 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 GK2Q14410 553 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 FAHD2BQ6P2I3 314 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 GVQW1Q8N7I0 195 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 CPEB3Q8NE35 698 aaKnown RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 LINC01560Q8TB33 94 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 WDR89Q96FK6 387 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 FAHD2AQ96GK7 314 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 CITED4Q96RK1 184 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 NICN1Q9BSH3 213 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 CST11Q9H112 138 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 KCNK7Q9Y2U2 307 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 KLF2Q9Y5W3 355 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-203ENST00000424234 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
ACTN4-203ENST00000424234 DHRS7CA6NNS2 312 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 IFNA6P05013 189 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 CSN2P05814 226 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 CD34P28906 385 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 S100A11P31949 105 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 HTR5AP47898 357 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 SRSF4Q08170 494 aaKnown RBP12.1□□□□□ -0.47
ACTN4-203ENST00000424234 KISS1Q15726 138 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 NKPD1Q17RQ9 610 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 RSPO1Q2MKA7 263 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-203ENST00000424234 DCAF12L2Q5VW00 463 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 DRAM2Q6UX65 266 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 SSX8Q7RTT4 187 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 LYG2Q86SG7 212 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 WFDC8Q8IUA0 241 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 TMEM104Q8NE00 496 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 OR52H1Q8NGJ2 320 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 C1QTNF6Q9BXI9 259 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 CHST5Q9GZS9 411 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.1□□□□□ -0.47
ACTN4-203ENST00000424234 KCNN3Q9UGI6 736 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 ATPIF1Q9UII2 106 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 VSIG4Q9Y279 399 aa12.1□□□□□ -0.47
ACTN4-203ENST00000424234 IGHV1-18A0A0C4DH31 117 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 RPS10-NUDT3A0A1W2PQS6 291 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 SOCS1O15524 211 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 CRTAPO75718 401 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-203ENST00000424234 CECR9P0C854 216 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 NAT2P11245 290 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 CRYGSP22914 178 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 ZBTB25P24278 435 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 HRH1P35367 487 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 PTGFRP43088 359 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 ZNF83P51522 516 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 RPS27AP62979 156 aaKnown RBP12.09□□□□□ -0.47
ACTN4-203ENST00000424234 FGL1Q08830 312 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 DHRS2Q13268 280 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 OR52W1Q6IF63 320 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 ALKBH2Q6NS38 261 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 FAM89BQ8N5H3 189 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 FAM169BQ8N8A8 192 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 OR1F12Q8NHA8 337 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 ANGPTL6Q8NI99 470 aa12.09□□□□□ -0.47
ACTN4-203ENST00000424234 OCSTAMPQ9BR26 566 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms