RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 FARS2O95363 451 aaKnown RBP10.31□□□□□ -0.76
PTPRN-204ENST00000423636 CHRM2P08172 466 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 DEFA5Q01523 94 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 RAB35Q15286 201 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 STK11Q15831 433 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 SPIN3Q5JUX0 258 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 PDSS1Q5T2R2 415 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 PEAR1Q5VY43 1037 aaPredicted RBP10.31□□□□□ -0.76
PTPRN-204ENST00000423636 IL1F10Q8WWZ1 152 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 METTL9Q9H1A3 318 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 A0A0A6YYH2 397 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 A6NJ64 397 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 SYNGR4O95473 234 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 CA6P23280 308 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 FCGR2CP31995 323 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 KCNMB1Q16558 191 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 HAGHLQ6PII5 290 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 INO80EQ8NBZ0 244 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 MRPL24Q96A35 216 aaKnown RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 BSCL2Q96G97 398 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 V9GYS6 101 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 RHBDL1O75783 438 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 CPT2P23786 658 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 THBS4P35443 961 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 IDH3GP51553 393 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 SRSF3P84103 164 aaKnown RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 EMG1Q92979 244 aaKnown RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 FAM173AQ9BQD7 235 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 GPR132Q9UNW8 380 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 FIGNL2A6NMB9 653 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 ZNF732B4DXR9 585 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 GP1BAP07359 652 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 MELTFP08582 738 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 M6PRP20645 277 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 MPGP29372 298 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 PLA2G5P39877 138 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 CEBPDP49716 269 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 CLLU1Q5K131 121 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 JMJD6Q6NYC1 403 aaPredicted RBP10.3□□□□□ -0.76
PTPRN-204ENST00000423636 OR5AP2Q8NGF4 316 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 TMEM9BQ9NQ34 198 aa10.3□□□□□ -0.76
PTPRN-204ENST00000423636 DCHS2Q6V1P9 2916 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 USF3Q68DE3 2245 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 PIGPP57054 158 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 SOX8P57073 446 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 MRPL21Q7Z2W9 205 aaKnown RBP10.29□□□□□ -0.76
PTPRN-204ENST00000423636 TMEM185AQ8NFB2 350 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 OR52H1Q8NGJ2 320 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 OR1S1Q8NH92 325 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 SECTM1Q8WVN6 248 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 CPNE4Q96A23 557 aaPredicted RBP10.29□□□□□ -0.76
PTPRN-204ENST00000423636 APH1AQ96BI3 265 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 PARD6AQ9NPB6 346 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 TAS2R3Q9NYW6 316 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 SPRR3Q9UBC9 169 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 A0A0U1RQV5 110 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 hCG_1807616A0A1W2PRN6 198 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 EIF3GO75821 320 aaKnown RBP eCLIP10.29□□□□□ -0.76
PTPRN-204ENST00000423636 PRF1P14222 555 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 CCL1P22362 96 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
PTPRN-204ENST00000423636 CLN3Q13286 438 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 IAH1Q2TAA2 248 aaPredicted RBP10.29□□□□□ -0.76
PTPRN-204ENST00000423636 TMEM128Q5BJH2 165 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 CLVS2Q5SYC1 327 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 LYZL2Q7Z4W2 148 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 FDCSPQ8NFU4 85 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 INTS12Q96CB8 462 aaKnown RBP10.29□□□□□ -0.76
PTPRN-204ENST00000423636 RNF126Q9BV68 326 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 RABL2AQ9UBK7 228 aaPredicted RBP10.29□□□□□ -0.76
PTPRN-204ENST00000423636 RABL2BQ9UNT1 228 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 SPEF1Q9Y4P9 236 aa10.29□□□□□ -0.76
PTPRN-204ENST00000423636 LOC102725191A0A1B0GVB3 256 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 LINC00862A6NCI5 91 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 TTLL8A6PVC2 850 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 CYTIPO60759 359 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 SP1P08047 785 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 SCTP09683 121 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 OR5AC1P0C628 307 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 NAT2P11245 290 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 OMGP23515 440 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 PSMB6P28072 239 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 MECP2P51608 486 aaKnown RBP10.28□□□□□ -0.76
PTPRN-204ENST00000423636 PDZK1IP1Q13113 114 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 PRDX4Q13162 271 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 P4HA3Q7Z4N8 544 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 KCNE4Q8WWG9 221 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 PP6455Q8WZ26 134 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 Q96M66 194 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 KCNMB2Q9Y691 235 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 GSTP1P09211 210 aaKnown RBP10.28□□□□□ -0.76
PTPRN-204ENST00000423636 MMP7P09237 267 aaPredicted RBP10.28□□□□□ -0.76
PTPRN-204ENST00000423636 IKZF1Q13422 519 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 ZNF585AQ6P3V2 769 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 OR2W3Q7Z3T1 314 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 OSR2Q8N2R0 312 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 OR1S2Q8NGQ3 325 aa10.28□□□□□ -0.76
PTPRN-204ENST00000423636 SSC4DQ8WTU2 575 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms