RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 RFKQ969G6 155 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 C10orf35Q96D05 121 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 ADI1Q9BV57 179 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 CDCA4Q9BXL8 241 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 SIGLEC9Q9Y336 463 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 DSCAML1Q8TD84 2053 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 LOC107986453A0A1B0GWG9 222 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 FAM90A8PA6NJQ4 464 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 CHST1O43916 411 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 SERPINA3P01011 423 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 FUT6P51993 359 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 EDDM3BP56851 147 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 MEF2CQ06413 473 aaPredicted RBP9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 UBE2V2Q15819 145 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 ZNF626Q68DY1 528 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 SLC25A26Q70HW3 274 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 GDPD3Q7L5L3 318 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 AMIGO2Q86SJ2 522 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 ENTHD1Q8IYW4 607 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 PP6455Q8WZ26 134 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 CFHR4Q92496 578 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 SLAMF9Q96A28 289 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 BORCS8Q96FH0 119 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 OSBPL10Q9BXB5 764 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 RIBC2Q9H4K1 309 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 SEBOXQ9HB31 216 aaPredicted RBP9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 ABCB10Q9NRK6 738 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 MTCH1Q9NZJ7 389 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 TCF19Q9Y242 345 aa9.36□□□□□ -0.91
SQSTM1-203ENST00000422245 IGKV1-27A0A075B6S5 117 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 hADV38S2A0JD32 116 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 ATP5HO75947 161 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 APOL3O95236 402 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 ARG1P05089 322 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 IGHV1-8P0DP01 117 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 PAX6P26367 422 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 CDC42P60953 191 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 ISL1P61371 349 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 ACTC1P68032 377 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 ACTA1P68133 377 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 LHFPL4Q7Z7J7 247 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 DNAAF1Q8NEP3 725 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 OR11H6Q8NGC7 330 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 RPS4Y2Q8TD47 263 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 EMG1Q92979 244 aaKnown RBP9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 MALSU1Q96EH3 234 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 CENPNQ96H22 339 aaPredicted RBP9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 SNX22Q96L94 193 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 ZNF714Q96N38 554 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 FAM53CQ9NYF3 392 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 GNG8Q9UK08 70 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 PITPNC1Q9UKF7 332 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 OAZ3Q9UMX2 235 aa9.35□□□□□ -0.91
SQSTM1-203ENST00000422245 TRBV2A0A0J9YWF9 115 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 TMEM82A0PJX8 343 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 F8VVB4 439 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 F8VWA3 439 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 H3BSH0 61 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 HAND1O96004 215 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 CYB5AP00167 134 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 OPN1MWP04001 364 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 OPN1MW2P0DN77 364 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 OPN1MW3P0DN78 364 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 VSIG10L2P0DP72 767 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 PRKACBP22694 351 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 RBP2P50120 134 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 DYNLT3P51808 116 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 ZNF91Q05481 1191 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 EDDM3AQ14507 147 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 FAM189A2Q15884 450 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 SPIN3Q5JUX0 258 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 TCF23Q7RTU1 214 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 C1QL4Q86Z23 238 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 EGFL6Q8IUX8 553 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 Q8N2B8 174 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 PRSS35Q8N3Z0 413 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 EME1Q96AY2 570 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 NKX3-1Q99801 234 aaPredicted RBP9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 ZNF702PQ9H963 129 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 IMPAD1Q9NX62 359 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 FOXJ3Q9UPW0 622 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 LINC00312Q9Y6C7 94 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 SESN1Q9Y6P5 492 aa9.34□□□□□ -0.91
SQSTM1-203ENST00000422245 PRKDCP78527 4128 aaKnown RBP9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 A6NDX4 124 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 F2RL2O00254 374 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 FBXO24O75426 580 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 CIB2O75838 187 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 ZNF20P17024 532 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 GABRR1P24046 479 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 PEX2P28328 305 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 POLR2IP36954 125 aaKnown RBP9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 KIR3DL2P43630 455 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 POU3F4P49335 361 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 ATP1B3P54709 279 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 OR12D2P58182 307 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 ZNF85Q03923 595 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 DYNC1I2Q13409 638 aaKnown RBP9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 GRK1Q15835 563 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms