RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 ETV7Q9Y603 341 aa10.49□□□□□ -0.73
TMEM53-206ENST00000420706 ASH1LQ9NR48 2969 aaKnown RBP10.49□□□□□ -0.73
TMEM53-206ENST00000420706 HRNRQ86YZ3 2850 aaPredicted RBP10.48□□□□□ -0.73
TMEM53-206ENST00000420706 PTPN13Q12923 2485 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 USF3Q68DE3 2245 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 UTP20O75691 2785 aaKnown RBP10.48□□□□□ -0.73
TMEM53-206ENST00000420706 PPIAL4EA0A075B759 164 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 PPIAL4DF5H284 164 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 CTDSP2O14595 271 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 SSX4O60224 188 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 CRTAPO75718 401 aaPredicted RBP10.48□□□□□ -0.73
TMEM53-206ENST00000420706 NXPH2O95156 264 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 ZNF205O95201 554 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 PPIAL4FP0DN26 164 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 MGMTP16455 207 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 PRKACAP17612 351 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 RAB6AP20340 208 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 CD80P33681 288 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 EFNB2P52799 333 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 TMEM33P57088 247 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 TEX36Q5VZQ5 186 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 SFRP4Q6FHJ7 346 aaPredicted RBP10.48□□□□□ -0.73
TMEM53-206ENST00000420706 C19orf18Q8NEA5 215 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 CMTM3Q96MX0 182 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 LPAR5Q9H1C0 372 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 MMP27Q9H306 513 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 CHODLQ9H9P2 273 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 BARX1Q9HBU1 254 aaPredicted RBP10.48□□□□□ -0.73
TMEM53-206ENST00000420706 IL36RNQ9UBH0 155 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 ST3GAL6Q9Y274 331 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 PPIAL4AQ9Y536 164 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 NPTNQ9Y639 398 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 A3GALT2U3KPV4 340 aa10.48□□□□□ -0.73
TMEM53-206ENST00000420706 IGHV3OR15-7A0A075B7D8 119 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 LGALS8O00214 317 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 RPS27AP62979 156 aaKnown RBP10.47□□□□□ -0.73
TMEM53-206ENST00000420706 ZNF146Q15072 292 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 DEFB113Q30KQ7 82 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 NHLRC3Q5JS37 347 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 METAP1DQ6UB28 335 aaPredicted RBP10.47□□□□□ -0.73
TMEM53-206ENST00000420706 BIVMQ86UB2 503 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 FAM90A1Q86YD7 464 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 NINJ1Q92982 152 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 MBD6Q96DN6 1003 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 PERPQ96FX8 193 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 POM121Q96HA1 1249 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 Q96M66 194 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 TM2D1Q9BX74 207 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 TMEM59Q9BXS4 323 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 SELENOIQ9C0D9 397 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 MIXL1Q9H2W2 232 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 TMEM165Q9HC07 324 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 MYOZ1Q9NP98 299 aaPredicted RBP10.47□□□□□ -0.73
TMEM53-206ENST00000420706 NLKQ9UBE8 527 aa10.47□□□□□ -0.73
TMEM53-206ENST00000420706 A0A0A6YYD4 124 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 OOEPA6NGQ2 149 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 CLDN25C9JDP6 229 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 TNFRSF13BO14836 293 aaPredicted RBP10.46□□□□□ -0.73
TMEM53-206ENST00000420706 HPGDSO60760 199 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 FSTL3O95633 263 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 KNG1P01042 644 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 PSG2P11465 335 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 MUC1P15941 1255 aaPredicted RBP10.46□□□□□ -0.73
TMEM53-206ENST00000420706 DUSP1P28562 367 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 PDLIM4P50479 330 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 ART1P52961 327 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 SNU13P55769 128 aaKnown RBP10.46□□□□□ -0.73
TMEM53-206ENST00000420706 RBM11P57052 281 aaKnown RBP10.46□□□□□ -0.73
TMEM53-206ENST00000420706 IL13RA2Q14627 380 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 PDCD1Q15116 288 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 CARTPTQ16568 116 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 TAF9Q16594 264 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 SMIM21Q3B7S5 101 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 PIGYQ3MUY2 71 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 Q6P435 159 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 PEG10Q86TG7 708 aaKnown RBP10.46□□□□□ -0.73
TMEM53-206ENST00000420706 CMTM4Q8IZR5 234 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 LRRC75A-AS1Q8N1F1 130 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 FAM89BQ8N5H3 189 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 ZNF525Q8N782 197 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 SAMD12Q8N8I0 201 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 DEFB108BQ8NET1 73 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 OR5T2Q8NGG2 359 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 SLC25A38Q96DW6 304 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 GAL3ST1Q99999 423 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 NICN1Q9BSH3 213 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 URM1Q9BTM9 101 aaKnown RBP10.46□□□□□ -0.73
TMEM53-206ENST00000420706 C6orf62Q9GZU0 229 aaPredicted RBP10.46□□□□□ -0.73
TMEM53-206ENST00000420706 ABCG5Q9H222 651 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 SEBOXQ9HB31 216 aaPredicted RBP10.46□□□□□ -0.73
TMEM53-206ENST00000420706 RHBDL2Q9NX52 303 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 PTTG2Q9NZH5 202 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 DNAJB11Q9UBS4 358 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 WIPI2Q9Y4P8 454 aa10.46□□□□□ -0.73
TMEM53-206ENST00000420706 AKAP6Q13023 2319 aa10.46□□□□□ -0.74
TMEM53-206ENST00000420706 NBPF19A0A087WUL8 3843 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 TRAV38-1A0A0B4J264 116 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 METTL21EPA6NDL7 271 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A10PA6NDY2 464 aa10.45□□□□□ -0.74
TMEM53-206ENST00000420706 FAM90A18PA6NE21 464 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms