RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 COLCA1Q6ZS62 124 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 TMUB2Q71RG4 321 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 ZNF767PQ75MW2 155 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 MRPL21Q7Z2W9 205 aaKnown RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 CDH26Q8IXH8 852 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 C17orf78Q8N4C9 275 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 TMEM178AQ8NBL3 297 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 HPSE2Q8WWQ2 592 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 EMG1Q92979 244 aaKnown RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 TOMM40LQ969M1 308 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 SPSB1Q96BD6 273 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 WBP1Q96G27 269 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 POM121L2Q96KW2 1035 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 DMRTA2Q96SC8 542 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 ZNF2Q9BSG1 426 aaPredicted RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 REPIN1Q9BWE0 567 aaKnown RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 WDR13Q9H1Z4 485 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 ZDHHC11Q9H8X9 412 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 TACC2O95359 2948 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 TLN1Q9Y490 2541 aaKnown RBP7.57□□□□□ -1.2
SNCA-206ENST00000420646 SPTAN1Q13813 2472 aaKnown RBP7.57□□□□□ -1.2
SNCA-206ENST00000420646 ARHGAP21Q5T5U3 1957 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 SYNGR1O43759 233 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 SCGNO76038 276 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 AGFG2O95081 481 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 BCL3P20749 454 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 FXYD4P59646 89 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 FOXF2Q12947 444 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 ANKRD55Q3KP44 614 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 ALKBH6Q3KRA9 238 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 CLEC18BQ6UXF7 455 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 OVCH2Q7RTZ1 564 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 P4HA3Q7Z4N8 544 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 ZNF546Q86UE3 836 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 TMEM17Q86X19 198 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 OSR2Q8N2R0 312 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 OR5AP2Q8NGF4 316 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 OR5M8Q8NGP6 311 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 TM2D1Q9BX74 207 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 LINC00470Q9BZP3 86 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 MFFQ9GZY8 342 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 PPA2Q9H2U2 334 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 GPR132Q9UNW8 380 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 SLC7A11Q9UPY5 501 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 ZNF724A8MTY0 619 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 ZNF732B4DXR9 585 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 ACTL6AO96019 429 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 SERPINF1P36955 418 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 IDH3GP51553 393 aaPredicted RBP7.57□□□□□ -1.2
SNCA-206ENST00000420646 RNPS1Q15287 305 aaKnown RBP7.57□□□□□ -1.2
SNCA-206ENST00000420646 SP6Q3SY56 376 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 FBXW9Q5XUX1 488 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 FOXRED2Q8IWF2 684 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 COQ8AQ8NI60 647 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 MITD1Q8WV92 249 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 TAAR6Q96RI8 345 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 CMSS1Q9BQ75 279 aaKnown RBP7.57□□□□□ -1.2
SNCA-206ENST00000420646 GHRLQ9UBU3 117 aa7.57□□□□□ -1.2
SNCA-206ENST00000420646 LEUTXA8MZ59 168 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 RPL36A-HNRNPH2H7BZ11 118 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 CA6P23280 308 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 S100A11P31949 105 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 FUT6P51993 359 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 PNLIPRP3Q17RR3 467 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 VWA1Q6PCB0 445 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 LHFPL2Q6ZUX7 228 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 PHB2Q99623 299 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 PRDM14Q9GZV8 571 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 MTCH1Q9NZJ7 389 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 ZNF107Q9UII5 783 aaPredicted RBP7.56□□□□□ -1.2
SNCA-206ENST00000420646 KIAA2026Q5HYC2 2103 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 RPS10-NUDT3A0A1W2PQS6 291 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 XRCC2O43543 280 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 HOXB5P09067 269 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 CHATP28329 748 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 P2RX3P56373 397 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 FAM74A1Q5RGS3 127 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 VAX1Q5SQQ9 334 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 RELL2Q8NC24 303 aaPredicted RBP7.56□□□□□ -1.2
SNCA-206ENST00000420646 OR1K1Q8NGR3 316 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 SPSB4Q96A44 273 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 C10orf35Q96D05 121 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 PRRX2Q99811 253 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 ZNF442Q9H7R0 627 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 RNF122Q9H9V4 155 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 CACNA1DQ01668 2161 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 BAHCC1Q9P281 2608 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 CD300LBA8K4G0 201 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 SERPINE3A8MV23 424 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 RHBDL1O75783 438 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 PDGFAP04085 211 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 OR5H8P0DN80 308 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 IGHV1-2P23083 117 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 PLP2Q04941 152 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 HAGHLQ6PII5 290 aaPredicted RBP7.56□□□□□ -1.2
SNCA-206ENST00000420646 ZDHHC22Q8N966 263 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 SLC30A7Q8NEW0 376 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 ANGPTL6Q8NI99 470 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 OR10C1Q96KK4 312 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 ZNF75AQ96N20 296 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms