RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ATP6V1B1P15313 513 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 CFHR2P36980 270 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 MTNR1AP48039 350 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ISL1P61371 349 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 SNRPGP62308 76 aaKnown RBP5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ACTC1P68032 377 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ACTA1P68133 377 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ELF3P78545 371 aaPredicted RBP5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF85Q03923 595 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 PAX8Q06710 450 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 RIPPLY1Q0D2K3 151 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 TP53I3Q53FA7 332 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 CEP78Q5JTW2 689 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 SLC25A30Q5SVS4 291 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF684Q5T5D7 378 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 LIPNQ5VXI9 398 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 MEDAGQ5VYS4 303 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 WDR25Q64LD2 544 aaPredicted RBP5.73□□□□□ -1.49
HMGN1-205ENST00000419378 BTNL3Q6UXE8 466 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF841Q6ZN19 808 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 KCTD8Q6ZWB6 473 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ELMOD2Q8IZ81 293 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 Q8N1X5 172 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 YIPF7Q8N8F6 280 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 OR10Z1Q8NGY1 313 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 SPATA3Q8NHX4 192 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 NANPQ8TBE9 248 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 RAB40AQ8WXH6 277 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 STMN2Q93045 179 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ITFG2Q969R8 447 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 RNFT2Q96EX2 444 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 RNF170Q96K19 258 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 TECTBQ96PL2 329 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 SLC29A1Q99808 456 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 SLC6A7Q99884 636 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ACOXLQ9NUZ1 547 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 AASSQ9UDR5 926 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 ENPP5Q9UJA9 477 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 OR52A1Q9UKL2 312 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 PIGLQ9Y2B2 252 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 GMPPBQ9Y5P6 360 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 SNX5Q9Y5X3 404 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 V9GYS6 101 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 DOCK11Q5JSL3 2073 aa5.73□□□□□ -1.49
HMGN1-205ENST00000419378 A0A1B0GTI1 187 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 A0A1B0GW55 424 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 METTL15A6NJ78 407 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 OR5B21A6NL26 309 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DHRS7CA6NNS2 312 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 SRRM5B3KS81 715 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF732B4DXR9 585 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 J3QRE1 110 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DVL1O14640 695 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 NDUFA2O43678 99 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ENSAO43768 121 aaKnown RBP5.72□□□□□ -1.49
HMGN1-205ENST00000419378 MTRF1O75570 445 aaKnown RBP5.72□□□□□ -1.49
HMGN1-205ENST00000419378 FCN3O75636 299 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 VENTXO95231 258 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DUX4L2P0CJ85 424 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DUX4L3P0CJ86 424 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DUX4L4P0CJ87 422 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DUX4L5P0CJ88 424 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DUX4L6P0CJ89 424 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DUX4L7P0CJ90 424 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 PPIAL4GP0DN37 164 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 MUC1P15941 1255 aaPredicted RBP5.72□□□□□ -1.49
HMGN1-205ENST00000419378 GABRB1P18505 474 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 CCL1P22362 96 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 NPY4RP50391 375 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 GPM6AP51674 278 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 GMFBP60983 142 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 GNG3P63215 75 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF91Q05481 1191 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ZSCAN26Q16670 478 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 MICBQ29980 383 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ODF4Q2M2E3 257 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 CEACAM21Q3KPI0 293 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ARMCX4Q5H9R4 360 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 FAM76BQ5HYJ3 339 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DMRTC1Q5HYR2 192 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 KLF17Q5JT82 389 aaPredicted RBP5.72□□□□□ -1.49
HMGN1-205ENST00000419378 WDR38Q5JTN6 314 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 PLCXD3Q63HM9 321 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 TMEM42Q69YG0 159 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 STUMQ69YW2 141 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 DUX4L9Q6RFH8 374 aaPredicted RBP5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ZBTB49Q6ZSB9 765 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 Q6ZSR3 168 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 MOB3CQ70IA8 216 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 CATSPERDQ86XM0 798 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ENTHD1Q8IYW4 607 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 BPIFB2Q8N4F0 458 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 FAM216BQ8N7L0 139 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 SCCPDHQ8NBX0 429 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF418Q8TF45 676 aaPredicted RBP5.72□□□□□ -1.49
HMGN1-205ENST00000419378 C22orf15Q8WYQ4 148 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 RORBQ92753 470 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 C12orf43Q96C57 262 aaKnown RBP5.72□□□□□ -1.49
HMGN1-205ENST00000419378 SEH1LQ96EE3 360 aa5.72□□□□□ -1.49
HMGN1-205ENST00000419378 C19orf24Q9BVV8 132 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms