RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SMPD3Q9NY59 655 aaPredicted RBP13.48□□□□□ -0.25
LINC00404-201ENST00000418660 SF3B6Q9Y3B4 125 aaKnown RBP13.48□□□□□ -0.25
LINC00404-201ENST00000418660 RPL36Q9Y3U8 105 aaKnown RBP13.48□□□□□ -0.25
LINC00404-201ENST00000418660 MMP24Q9Y5R2 645 aa13.48□□□□□ -0.25
LINC00404-201ENST00000418660 A0A1W2PRD5 423 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 A0A1W2PRF3 423 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 A0A1W2PRM7 423 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 K7N7A8 449 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 CYB5AP00167 134 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 IGHV4-59P01825 116 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
LINC00404-201ENST00000418660 MDKP21741 143 aaPredicted RBP13.47□□□□□ -0.25
LINC00404-201ENST00000418660 OMGP23515 440 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 AZGP1P25311 298 aaKnown RBP13.47□□□□□ -0.25
LINC00404-201ENST00000418660 SAA4P35542 130 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 MTCP1P56278 107 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 COL10A1Q03692 680 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 MRPL28Q13084 256 aaKnown RBP13.47□□□□□ -0.25
LINC00404-201ENST00000418660 LPCAT4Q643R3 524 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 LHFPL2Q6ZUX7 228 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 MKXQ8IYA7 352 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 Q8IYB0 196 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 PNKDQ8N490 385 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 ZNF676Q8N7Q3 588 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 OR4M1Q8NGD0 313 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 OR52I1Q8NGK6 324 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 OR13C3Q8NGS6 347 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 OR10AC1Q8NH08 325 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 SPSB1Q96BD6 273 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 ISG20L2Q9H9L3 353 aaKnown RBP13.47□□□□□ -0.25
LINC00404-201ENST00000418660 SEBOXQ9HB31 216 aaPredicted RBP13.47□□□□□ -0.25
LINC00404-201ENST00000418660 C1RLQ9NZP8 487 aa13.47□□□□□ -0.25
LINC00404-201ENST00000418660 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.47□□□□□ -0.25
LINC00404-201ENST00000418660 A0A1B0GUS0 222 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 MEIOCA2RUB1 952 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 INMTO95050 263 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 NDUFA7O95182 113 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 HCP5Q6MZN7 132 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 C11orf42Q8N5U0 333 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 OR51A4Q8NGJ6 313 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 OR4F5Q8NH21 305 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 EMG1Q92979 244 aaKnown RBP13.46□□□□□ -0.25
LINC00404-201ENST00000418660 SLITRK2Q9H156 845 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 ZNRD1Q9P1U0 126 aa13.46□□□□□ -0.25
LINC00404-201ENST00000418660 hCG_1809904A0A1W2PP81 198 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 A0A1W2PPE2 198 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 A0A1W2PR64 198 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 A0A1W2PRV1 198 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 GPR137BO60478 399 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 ZNF737O75373 536 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 WBP4O75554 376 aaKnown RBP13.45□□□□□ -0.26
LINC00404-201ENST00000418660 PAHP00439 452 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 MT-ND2P03891 347 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 OCM2P0CE71 109 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 OCMP0CE72 109 aaPredicted RBP13.45□□□□□ -0.26
LINC00404-201ENST00000418660 NPBWR2P48146 333 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 POU3F4P49335 361 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 GBX2P52951 348 aaPredicted RBP13.45□□□□□ -0.26
LINC00404-201ENST00000418660 RAG2P55895 527 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 RELBQ01201 579 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 MIDNQ504T8 468 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 ASCC1Q8N9N2 400 aaKnown RBP13.45□□□□□ -0.26
LINC00404-201ENST00000418660 HAVCR2Q8TDQ0 301 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 SNX22Q96L94 193 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 OPALINQ96PE5 141 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 JAM3Q9BX67 310 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 HEXA-AS1Q9H8Q6 139 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 BEX1Q9HBH7 125 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 FGF20Q9NP95 211 aaPredicted RBP13.45□□□□□ -0.26
LINC00404-201ENST00000418660 C8orf4Q9NR00 106 aa13.45□□□□□ -0.26
LINC00404-201ENST00000418660 TRBV2A0A0J9YWF9 115 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 BTBD17A6NE02 478 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 TMEM212A6NML5 194 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 E9PI62 339 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 ANGPTL7O43827 346 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 CCDC159P0C7I6 412 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 CCL3L1P16619 93 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 BCL3P20749 454 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 PDZK1IP1Q13113 114 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 ZNF273Q14593 569 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 TAF9Q16594 264 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 ZNF691Q5VV52 312 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 GDPGP1Q6ZNW5 385 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 OR8H2Q8N162 312 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 FAM58AQ8N1B3 248 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 PACRGLQ8N7B6 248 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 OR13C9Q8NGT0 318 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 OR5AK2Q8NH90 309 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 COMMD4Q9H0A8 199 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 ZCCHC4Q9H5U6 513 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 NEK6Q9HC98 313 aa13.44□□□□□ -0.26
LINC00404-201ENST00000418660 TMEM82A0PJX8 343 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 SPRY1O43609 319 aaPredicted RBP13.43□□□□□ -0.26
LINC00404-201ENST00000418660 ALX3O95076 343 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 ZFPL1O95159 310 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 HAND1O96004 215 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 LIMS3P0CW19 117 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 LIMS4P0CW20 117 aa13.43□□□□□ -0.26
LINC00404-201ENST00000418660 PIPP12273 146 aaPredicted RBP13.43□□□□□ -0.26
LINC00404-201ENST00000418660 ERVFRD-1P60508 538 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms