RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SMCO1Q147U7 214 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 ABCA11PQ4W5N1 156 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 RAB11FIP2Q7L804 512 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 OR1F12Q8NHA8 337 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 ESRP2Q9H6T0 727 aaKnown RBP12.57□□□□□ -0.4
HDAC9-208ENST00000417496 TUBD1Q9UJT1 453 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 A0A1B0GV50 99 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 TAAR5O14804 337 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 RRP8O43159 456 aaKnown RBP12.56□□□□□ -0.4
HDAC9-208ENST00000417496 CXCL13O43927 109 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 NRASP01111 189 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 FGF5P12034 268 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 CHATP28329 748 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 RBP2P50120 134 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 PPT1P50897 306 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 SUCLG1P53597 346 aaKnown RBP12.56□□□□□ -0.4
HDAC9-208ENST00000417496 PSG4Q00888 419 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF92Q03936 586 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF528Q3MIS6 628 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 FAM76BQ5HYJ3 339 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 OR14L1PQ8NHC6 308 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 GPHA2Q96T91 129 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 WDR54Q9H977 334 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 WFDC1Q9HC57 220 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 NECAP2Q9NVZ3 263 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 P4HTMQ9NXG6 502 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 ST3GAL6Q9Y274 331 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 SIT1Q9Y3P8 196 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 NSG1A0A0A6YYJ2 146 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 NUDT19A8MXV4 375 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 CBR3O75828 277 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 CD5P06127 495 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 RGS19P49795 217 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 RAB13P51153 203 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 CARD18P57730 90 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 EIF5AL1Q6IS14 154 aaKnown RBP12.56□□□□□ -0.4
HDAC9-208ENST00000417496 SLC23A3Q6PIS1 610 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 Q6ZSR3 168 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 PIGCQ92535 297 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF700Q9H0M5 742 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 SLC2A9Q9NRM0 540 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 DECR2Q9NUI1 292 aa12.56□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF587BE7ETH6 402 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 TRAPPC6AO75865 159 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 JTBO76095 146 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 SPINK2P20155 84 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 NHLH2Q02577 135 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF616Q08AN1 781 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 TMEM187Q14656 261 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 ARL6IP1Q15041 203 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 RAB35Q15286 201 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 NSUN5P2Q63ZY6 315 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 AGBL5Q8NDL9 886 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 CLDN23Q96B33 292 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 SPSB1Q96BD6 273 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 KIRREL1Q96J84 757 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 SH2D2AQ9NP31 389 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 KCNIP3Q9Y2W7 256 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 RFNGQ9Y644 331 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 URB1O60287 2271 aaKnown RBP12.55□□□□□ -0.4
HDAC9-208ENST00000417496 APOC1P02654 83 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 RFC3P40938 356 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 F2RL1P55085 397 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 B3GALT5-AS1P59052 145 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 IL11RAQ14626 422 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 TGIF1Q15583 401 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 EXT1Q16394 746 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 CEACAM16Q2WEN9 425 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 CALHM1Q8IU99 346 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 NAA60Q9H7X0 242 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 TMEM38BQ9NVV0 291 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 AHCTF1Q8WYP5 2266 aa12.55□□□□□ -0.4
HDAC9-208ENST00000417496 FAM157AC9JC47 383 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 CA11O75493 328 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 NPBWR2P48146 333 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 RAC3P60763 192 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 EIF5AP63241 154 aaKnown RBP12.54□□□□□ -0.4
HDAC9-208ENST00000417496 PEA15Q15121 130 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 PPA1Q15181 289 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 SWI5Q1ZZU3 235 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 MIDNQ504T8 468 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 WIPI1Q5MNZ9 446 aaPredicted RBP12.54□□□□□ -0.4
HDAC9-208ENST00000417496 MEX3BQ6ZN04 569 aaKnown RBP12.54□□□□□ -0.4
HDAC9-208ENST00000417496 AAED1Q7RTV5 226 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 GPR137CQ8N3F9 429 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
HDAC9-208ENST00000417496 C10orf35Q96D05 121 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF845Q96IR2 970 aaPredicted RBP12.54□□□□□ -0.4
HDAC9-208ENST00000417496 ZDHHC8Q9ULC8 765 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 EDARQ9UNE0 448 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 MLF1P58340 268 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 FAM3AP98173 230 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 EIF3IQ13347 325 aaKnown RBP12.54□□□□□ -0.4
HDAC9-208ENST00000417496 IGSF11Q5DX21 431 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 RTL6Q6ICC9 239 aa12.54□□□□□ -0.4
HDAC9-208ENST00000417496 GGNQ86UU5 652 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms