RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MRPL48Q96GC5 212 aaKnown RBP20.63■□□□□ 0.89
VEGFA-208ENST00000417285 PPA2Q9H2U2 334 aa20.63■□□□□ 0.89
VEGFA-208ENST00000417285 FBLN5Q9UBX5 448 aa20.63■□□□□ 0.89
VEGFA-208ENST00000417285 TGP01266 2768 aa20.63■□□□□ 0.89
VEGFA-208ENST00000417285 H3BUX3 64 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 K7N7A8 449 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 EBAG9O00559 213 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 SLC16A6O15403 523 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 CHRM2P08172 466 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 LGALS4P56470 323 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 ERVFRD-1P60508 538 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 DEFA6Q01524 100 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 SLC35E4Q6ICL7 350 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 RDH10Q8IZV5 341 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 ACBD7Q8N6N7 88 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 OR4M1Q8NGD0 313 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 AJUBAQ96IF1 538 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 CEP19Q96LK0 163 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 MBOAT4Q96T53 435 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 MYCBPQ99417 103 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-208ENST00000417285 RAB18Q9NP72 206 aa20.62■□□□□ 0.89
VEGFA-208ENST00000417285 OR12D2P58182 307 aa20.61■□□□□ 0.89
VEGFA-208ENST00000417285 ACTA2P62736 377 aa20.61■□□□□ 0.89
VEGFA-208ENST00000417285 ACTG2P63267 376 aa20.61■□□□□ 0.89
VEGFA-208ENST00000417285 LRRC75BQ2VPJ9 315 aa20.61■□□□□ 0.89
VEGFA-208ENST00000417285 FDX2Q6P4F2 183 aa20.61■□□□□ 0.89
VEGFA-208ENST00000417285 RNF166Q96A37 237 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-208ENST00000417285 EXOGQ9Y2C4 368 aaKnown RBP20.61■□□□□ 0.89
VEGFA-208ENST00000417285 IGKV1-27A0A075B6S5 117 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 MPZL2O60487 215 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 ISG15P05161 165 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 HTR1AP08908 422 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 C11orf88Q6PI97 169 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 DNAAF1Q8NEP3 725 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 C17orf50Q8WW18 174 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 SLAMF9Q96A28 289 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 Q96MT0 163 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 SEBOXQ9HB31 216 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-208ENST00000417285 S100A14Q9HCY8 104 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 MTCH1Q9NZJ7 389 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 FRRS1LQ9P0K9 344 aa20.6■□□□□ 0.89
VEGFA-208ENST00000417285 C17orf98A8MV24 154 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 J3QLW9 94 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 ZNF19P17023 458 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 ZNF20P17024 532 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 GABRA5P31644 462 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 RBP2P50120 134 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 CCR9P51686 369 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 ATP1B3P54709 279 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 COL10A1Q03692 680 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 SLC25A26Q70HW3 274 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 Q8IYB0 196 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 ASCC1Q8N9N2 400 aaKnown RBP20.59■□□□□ 0.89
VEGFA-208ENST00000417285 LGALS12Q96DT0 336 aa20.59■□□□□ 0.89
VEGFA-208ENST00000417285 ADAT3Q96EY9 351 aaPredicted RBP20.59■□□□□ 0.89
VEGFA-208ENST00000417285 CYB5AP00167 134 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 RBP4P02753 201 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 CCL3L1P16619 93 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 GABRB1P18505 474 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 KIR2DS4P43632 304 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 NANOS3P60323 173 aaKnown RBP20.58■□□□□ 0.89
VEGFA-208ENST00000417285 ZNF91Q05481 1191 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 LIAT1Q6ZQX7 453 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 ZBTB49Q6ZSB9 765 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 UTS2BQ765I0 119 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 GDPD3Q7L5L3 318 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 EGFL6Q8IUX8 553 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 ENTHD1Q8IYW4 607 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 PQLC1Q8N2U9 271 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 C4orf36Q96KX1 117 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 AASSQ9UDR5 926 aa20.58■□□□□ 0.89
VEGFA-208ENST00000417285 ZNF737O75373 536 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 INMTO95050 263 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 OCM2P0CE71 109 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 OCMP0CE72 109 aaPredicted RBP20.57■□□□□ 0.88
VEGFA-208ENST00000417285 DBTP11182 482 aaKnown RBP20.57■□□□□ 0.88
VEGFA-208ENST00000417285 ATF1P18846 271 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 PRKACBP22694 351 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 ZNF273Q14593 569 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 PDLIM3Q53GG5 364 aaPredicted RBP20.57■□□□□ 0.88
VEGFA-208ENST00000417285 OR4C13Q8NGP0 309 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 EMG1Q92979 244 aaKnown RBP20.57■□□□□ 0.88
VEGFA-208ENST00000417285 FGGYQ96C11 551 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 PELI1Q96FA3 418 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 HHLA2Q9UM44 414 aa20.57■□□□□ 0.88
VEGFA-208ENST00000417285 FAM90A8PA6NJQ4 464 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 F8VVB4 439 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 F8VWA3 439 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 ZNF728P0DKX0 622 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 COX7A1P24310 79 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 AZGP1P25311 298 aaKnown RBP20.56■□□□□ 0.88
VEGFA-208ENST00000417285 DLX6P56179 175 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 MTCP1P56278 107 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 MEF2CQ06413 473 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-208ENST00000417285 GALEQ14376 348 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 LY6EQ16553 131 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 LHFPL2Q6ZUX7 228 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 OR13D1Q8NGV5 346 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 RHOXF1Q8NHV9 184 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 PPP1R35Q8TAP8 253 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms