RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 UHRF2Q96PU4 802 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 ATP5SQ99766 215 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 GINS3Q9BRX5 216 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 FAAP24Q9BTP7 215 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 SLC29A3Q9BZD2 475 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 CDC42EP4Q9H3Q1 356 aaKnown RBP3.44□□□□□ -1.86
LINC01048-201ENST00000414480 CXorf21Q9HAI6 301 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 NMRAL1Q9HBL8 299 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 TAF9BQ9HBM6 251 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 TMEM38BQ9NVV0 291 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 RCC2Q9P258 522 aaKnown RBP3.44□□□□□ -1.86
LINC01048-201ENST00000414480 B4GALT7Q9UBV7 327 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 FTSJ1Q9UET6 329 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 ZNF107Q9UII5 783 aaPredicted RBP3.44□□□□□ -1.86
LINC01048-201ENST00000414480 TNFSF18Q9UNG2 199 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 TCF19Q9Y242 345 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 TMED7Q9Y3B3 224 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 INSL5Q9Y5Q6 135 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 NF1P21359 2839 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 KIAA1549LQ6ZVL6 1849 aa3.44□□□□□ -1.86
LINC01048-201ENST00000414480 MTORP42345 2549 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 BOD1L1Q8NFC6 3051 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 KNL1Q8NG31 2342 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 PLXND1Q9Y4D7 1925 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OTOGQ6ZRI0 2925 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 IGLV3-22A0A075B6J6 115 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 PRAMEF33A0A0G2JMD5 474 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 GLYATL1P3A0A0U1RQE8 302 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 A0A1W2PR48 441 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 DAPL1A0PJW8 107 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 GXYLT2A0PJZ3 443 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 TMEM189A5PLL7 270 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 CDHR4A6H8M9 788 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ASPDHA6ND91 283 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 FAM90A10PA6NDY2 464 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 FAM90A27PA6NNH2 459 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 A8MXK9 166 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 NPIPB11E5RHQ5 1161 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 E7EQ34 232 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 J3QR89 54 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 K7EQS6 105 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SIRPB1O00241 398 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 PTGESO14684 152 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ACOT8O14734 319 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 CCL25O15444 150 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 MFSD11O43934 449 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 EDF1O60869 148 aaKnown RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ATP6AP2O75787 350 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 LALBAP00709 142 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 EDN1P05305 212 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ZNF883P0CG24 379 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ESDP10768 282 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 IRF2P14316 349 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 FOLR1P15328 257 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ABOP16442 354 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 IGFBP2P18065 325 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 MYL12AP19105 171 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 RPS3P23396 243 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 CRHBPP24387 322 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 NSG1P42857 185 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 BDKRB1P46663 353 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 GABRA2P47869 451 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 CDX1P47902 265 aaPredicted RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 RFX2P48378 723 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 CRISP1P54107 249 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 AQP4P55087 323 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 DLX6P56179 175 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 NCS1P62166 190 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SNRPD2P62316 118 aaKnown RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 EWSR1Q01844 656 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OC90Q02509 493 aaPredicted RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SRSF4Q08170 494 aaKnown RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 RUNX3Q13761 415 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 PYY3Q5JQD4 70 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ACTL10Q5JWF8 245 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 TPTE2P1Q5T6R2 138 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 FAM102AQ5T9C2 384 aaPredicted RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 RTL6Q6ICC9 239 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 GJB7Q6PEY0 223 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 WDR82Q6UXN9 313 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 UNQ9370/PRO34162Q6UXP9 181 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 Q6ZSR9 355 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SLC35F2Q8IXU6 374 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 CMTM1Q8IZ96 169 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 DEFB119Q8N690 84 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 POC1AQ8NBT0 407 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SLC30A7Q8NEW0 376 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 BEST4Q8NFU0 473 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR4M1Q8NGD0 313 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR56A4Q8NGH8 313 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR10D4PQ8NGN7 298 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR9I1Q8NGQ6 314 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR2Y1Q8NGV0 311 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR5B3Q8NH48 314 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR51Q1Q8NH59 317 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 MBD3L2Q8NHZ7 208 aaPredicted RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 RXFP4Q8TDU9 374 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 CRYGNQ8WXF5 182 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ASB13Q8WXK3 278 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SLC7A6Q92536 515 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms