RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 KLK3P07288 261 aaPredicted RBP12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF728P0DKX0 622 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 CD38P28907 300 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 TMEM187Q14656 261 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 C4orf17Q53FE4 359 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 NSUN5P2Q63ZY6 315 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 UNQ6494/PRO21346Q6UXR6 183 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 FBXW12Q6X9E4 464 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 UBAC2Q8NBM4 344 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 RHBDD1Q8TEB9 315 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 TP53RKQ96S44 253 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 PAPOLGQ9BWT3 736 aaKnown RBP12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 NELFAQ9H3P2 528 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 TGIF2-C20orf24A0A0A6YYL0 155 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 HNF4GQ14541 408 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 ANKRD37Q7Z713 158 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF700Q9H0M5 742 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 LIPGQ9Y5X9 500 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 URB1O60287 2271 aaKnown RBP12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 LILRA5A6NI73 299 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 HSPB6O14558 160 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 HEXBP07686 556 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 PTGDSP41222 190 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 PLEK2Q9NYT0 353 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 LUZP4Q9P127 313 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 NKX2-6A6NCS4 301 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 EPHA1P21709 976 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF674Q2M3X9 581 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 FAM180AQ6UWF9 173 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 SLC22A8Q8TCC7 542 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 SLC35B3Q9H1N7 401 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 P4HTMQ9NXG6 502 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 HS3ST3B1Q9Y662 390 aa12.69□□□□□ -0.38
SEMA3F-202ENST00000413852 CTSDP07339 412 aaPredicted RBP12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 SOHLH1Q5JUK2 328 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF468Q5VIY5 522 aaPredicted RBP12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 SLC35G3Q8N808 338 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF383Q8NA42 475 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 TCTEX1D2Q8WW35 142 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 SLC2A9Q9NRM0 540 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 HDGFL3Q9Y3E1 203 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 GAPDHP04406 335 aaKnown RBP12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 CCR5P51681 352 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 IZUMO4Q1ZYL8 232 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 RNF212Q495C1 297 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 SUMF2Q8NBJ7 301 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 NAT6Q93015 286 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 PFDN5Q99471 154 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 NUDT16L1Q9BRJ7 211 aaKnown RBP12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 NAA60Q9H7X0 242 aa12.68□□□□□ -0.38
SEMA3F-202ENST00000413852 NSG1A0A0A6YYJ2 146 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 IGKV1-12A0A0C4DH73 117 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 IGSF23A1L1A6 192 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 CXorf65A6NEN9 183 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 E5RGE8 158 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 IGKV1D-12P01611 117 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 PRF1P14222 555 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 RGS19P49795 217 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ENDOGQ14249 297 aaKnown RBP12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 RSU1Q15404 277 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 CXorf66Q5JRM2 361 aaPredicted RBP12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 NFAM1Q8NET5 270 aaPredicted RBP12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 OR2G3Q8NGZ4 309 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 Q8WTZ3 238 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 TMEM171Q8WVE6 324 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 RAB39BQ96DA2 213 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 NSG2Q9Y328 171 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF724A8MTY0 619 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 H3BP45 60 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 SSSCA1O60232 199 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 P2RY1P47900 373 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF84P51523 738 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ERVFRD-1P60508 538 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF574Q6ZN55 896 aaPredicted RBP12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF600Q6ZNG1 722 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 HIST2H3AQ71DI3 136 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF501Q96CX3 271 aaPredicted RBP12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 PRO1933Q9H354 126 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ARHGAP21Q5T5U3 1957 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 C2CD4DB7Z1M9 353 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 H3BQ15 152 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 DHRS3O75911 302 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 ATP6V0CP27449 155 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 TAGLN2P37802 199 aaKnown RBP12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 EWSR1Q01844 656 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 LURAP1LQ8IV03 231 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 FBXL14Q8N1E6 418 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 WDSUB1Q8N9V3 476 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 HAS2Q92819 552 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 Q96M66 194 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 TOLLIPQ9H0E2 274 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 MTIF3Q9H2K0 278 aaKnown RBP12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 DOK5Q9P104 306 aa12.67□□□□□ -0.38
SEMA3F-202ENST00000413852 BORCS7-ASMTA0A0B4J1R7 106 aa12.66□□□□□ -0.38
SEMA3F-202ENST00000413852 SERPINE3A8MV23 424 aa12.66□□□□□ -0.38
SEMA3F-202ENST00000413852 RNF224P0DH78 156 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms